View conserved binding sites


Gene
GM04G38730
Description
protein deacetylase SRT2
Alias
Glyma04g38730;Glyma04g38730.1;PAC:26305739;Glyma04g38730.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-115
Matrix_110ATABI4;AT3G57600Not availableUpstream-114
Matrix_119RRTF1Not availableUpstream-116
Matrix_138RRTF1Not availableUpstream-116
Matrix_146ORA47Not availableUpstream-115
Matrix_147ERF3;AT1G80580Not availableUpstream-115
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-114
Matrix_190ATERF1Not availableUpstream-114
Matrix_224ERF1Not availableUpstream-116
Matrix_234RAP2.3Not availableUpstream-115
Matrix_243RAP2.12;RAP2.2Not availableUpstream-114
Matrix_252RAP2.6Not availableUpstream-115
Matrix_261ATERF-1Not availableUpstream-115
Matrix_272DEAR4Not availableUpstream-115
Matrix_287ERF2Not availableUpstream-115
Matrix_288RAP2.3Not availableUpstream-116
Matrix_295ERF1Not availableUpstream-115
Matrix_305PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-100
Matrix_321HRDNot availableUpstream-115
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-116
Matrix_334AT3G23230Not availableUpstream-114
Matrix_343AT2G33710Not availableUpstream-115
Matrix_355ERF10;ERF11Not availableUpstream-116
Matrix_360ORA59Not availableUpstream-115
Matrix_363RAP2.3Not availableUpstream-116
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-115
Matrix_378ATERF1Not availableUpstream-115
Matrix_409DEAR3Not availableUpstream-116
Matrix_426CRF1;CRF2Not availableUpstream-114
Matrix_45DRNNot availableUpstream-115
Matrix_473RRTF1Not availableUpstream-115
Matrix_484ATERF13Not availableUpstream-115
Matrix_493AT1G22985;AT1G71130Not availableUpstream-115
Matrix_50ATERF14;AT5G43410Not availableUpstream-116
Matrix_506DRNL;ATERF-4Not availableUpstream-114
Matrix_517ERF12Not availableUpstream-115
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-116
Upstream-45
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-114
Matrix_91CRF3Not availableUpstream-115
Motif_141BP5OSWXOsBP-5 (a MYC protein) binding site in Wx promoterUpstream-97
Motif_163BOXCPSAS1Box C in pea (P.s.) asparagine synthetase (AS1) gene; Found at -45; AS1 is negatively regulated by light; Box C binds with nuclear proteins, which was competed by a putative repressor element RE1Upstream-39
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-96
Motif_297Bellringer/replumless/pennywise BS1 IN AGRepression of AGAMOUS by BELLRINGER in Floral and Inflorescence MeristemsDownstream7489
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-114
Motif_321TATABOX5TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysisDownstream7480
Motif_342POLASIG1PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in ArabidopsisDownstream7479
Motif_437ANAERO2CONSENSUSOne of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1)Upstream-46
Motif_567T/GBOXATPIN2T/G-box found in tomato proteinase inhibitor II (pin2) and leucine aminopeptidase (LAP) genes; Involved in jasmonate (JA) induction of these genes; bHLH-Leu zipper JAMYC2 and JAMYC10 proteins specifically recognize this motifUpstream-96
Motif_570POLASIG2PolyA signal; poly A signal found in rice alpha-amylase; -10 to -30 in the case of animal genesDownstream7490
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Downstream7478