Matrix_101 | ERF5 | Not available | Upstream | -290 |
Matrix_126 | RBE | Not available | Upstream | -266 |
Matrix_146 | ORA47 | Not available | Upstream | -290 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -270 |
| | | Upstream | -271 |
Matrix_224 | ERF1 | Not available | Upstream | -269 |
| | | Upstream | -270 |
Matrix_243 | RAP2.12;RAP2.2 | Not available | Upstream | -269 |
| | | Upstream | -270 |
Matrix_272 | DEAR4 | Not available | Upstream | -290 |
Matrix_287 | ERF2 | Not available | Upstream | -268 |
| | | Upstream | -269 |
Matrix_295 | ERF1 | Not available | Upstream | -270 |
| | | Upstream | -271 |
Matrix_301 | PIL5 | Not available | Upstream | -289 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -269 |
| | | Upstream | -270 |
Matrix_334 | AT3G23230 | Not available | Upstream | -269 |
| | | Upstream | -270 |
Matrix_343 | AT2G33710 | Not available | Upstream | -268 |
| | | Upstream | -269 |
Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -270 |
| | | Upstream | -271 |
Matrix_356 | PRR5 | Not available | Upstream | -291 |
Matrix_360 | ORA59 | Not available | Upstream | -270 |
| | | Upstream | -271 |
Matrix_372 | ANAC81 | DNA binding specificity of ATAF2, a NAC domain transcription factor targeted for degradation by Tobacco mosaic virus | Upstream | -69 |
| | | Upstream | -82 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -269 |
| | | Upstream | -270 |
Matrix_405 | DREB2C | Not available | Upstream | -267 |
Matrix_406 | ATERF-7 | Not available | Upstream | -270 |
| | | Upstream | -271 |
Matrix_409 | DEAR3 | Not available | Upstream | -289 |
Matrix_414 | AGL15 | Not available | Upstream | -101 |
| | | Upstream | -102 |
| | | Upstream | -229 |
| | | Upstream | -230 |
Matrix_462 | ATERF-8 | Not available | Upstream | -270 |
| | | Upstream | -271 |
Matrix_484 | ATERF13 | Not available | Upstream | -270 |
| | | Upstream | -271 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -269 |
| | | Upstream | -270 |
Matrix_77 | PRR5 | Not available | Upstream | -291 |
| | | Upstream | -292 |
Motif_165 | AP3SV40 | AP-3 binding site consensus sequence in enhancer regions of SV40, MMTV, MLV, IL2 | Upstream | -1766 |
Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -294 |
Motif_221 | MYBCORE | Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis | Upstream | -12 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -271 |
Motif_318 | CGCGBOXAT | CGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRs | Upstream | -294 |
Motif_609 | AP2 | The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence element | Upstream | -152 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -81 |
Motif_672 | AP2 | The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence element | Upstream | -152 |
Motif_682 | GT1GMSCAM4 | GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expression | Upstream | -81 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -320 |
| | | Upstream | -322 |
| | | Upstream | -324 |