View conserved binding sites


Gene
GM02G15100
Description
Cyclin-dependent kinase inhibitor 6
Alias
Glyma02g15100;Glyma02g15100.1;PAC:26287417;Glyma02g15100.1
Binding siteNameDescriptionLocationPosition
Matrix_113ABI5Not availableDownstream1734
Matrix_122ABF1;AREB2Not availableDownstream1734
Matrix_179AtMYB84;MYB36;MYB68;O49746_ARATHNot availableUpstream-51
Matrix_281TCP13Not availableUpstream-129
Matrix_396AP3Not availableIntron895
Matrix_48PINot availableUpstream-51
Matrix_94TCP5Not availableDownstream1728
Upstream-129
Motif_182MYB2CONSENSUSATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22Intron897
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisIntron897
Motif_336MYBMOUSEBinding site for mouse c-myb proteinIntron897
Motif_465AtMYB44Two novel MYB homologues with changed expression in late embryogenesis-defective Arabidopsis mutantsIntron898
Motif_477MYB1;MYB2An Arabidopsis myb homolog is induced by dehydration stress and its gene product binds to the conserved MYB recognition sequence;Evidence for a role for AtMYB2 in the induction of the Arabidopsis alcohol dehydrogenase gene (ADH1) by low oxygenIntron898
Motif_630WBOXNTCHN48W box identified in the region between -125 and -69 of a tobacco class I basic chitinase gene CHN48; NtWRKY1, NtWRKY2 and NtWRKY4 bound to W box; NtWRKYs possibly involved in elicitor-respsonsive transcription of defense genes in tobaccoIntron900
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGADownstream1018
Downstream1016
Downstream1014
Motif_88MYB2ATBinding site for ATMYB2, an Arabidopsis MYB homolog; ATMYB2 binds oligonucleotides that contained a consensus MYB recognition sequence (TAACTG), such as is in the SV40 enhancer and the maize bronze-1 promoter; ATMYB2 is involved in regulation of genes that are responsive to water stress in ArabidopsisIntron897