View conserved binding sites


Gene
GM01G36890
Description
3-dehydroquinate synthase
Alias
Glyma01g36890;Glyma01g36890.1;PAC:26325709;Glyma01g36890.1
Binding siteNameDescriptionLocationPosition
Matrix_127AtMYB15More than 80R2R3-MYB regulatory genes in the genome of Arabidopsis thalianaUpstream-40
Upstream-41
Matrix_141AT3G25990Not availableUpstream-117
Matrix_179AtMYB84;MYB36;MYB68;O49746_ARATHNot availableUpstream-40
Matrix_371MYB7;AtMYB6;AtMYB32;ATMYB4Not availableUpstream-44
Upstream-45
Matrix_401MYB55Not availableUpstream-40
Upstream-41
Matrix_452MYB46Not availableUpstream-40
Matrix_510AtMYB84More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thalianaUpstream-40
Upstream-41
Motif_165AP3SV40AP-3 binding site consensus sequence in enhancer regions of SV40, MMTV, MLV, IL2Upstream-33
Motif_192BOXLCOREDCPALConsensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitroUpstream-44
Motif_207MAMMALENHANCore sequence in enhancers from polyoma virus and from the IgM heavy chain geneUpstream-34
Motif_254MYB46;MYB83MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genesUpstream-37
Upstream-44
Upstream-121
Upstream-152
Motif_292MYBPZMCore of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genesUpstream-44
Upstream-1075
Motif_332SV40COREENHANSV40 core enhancer; Similar sequences found in rbcS genesUpstream-34
Motif_353HEXAMERATH4hexamer motif of Arabidopsis thaliana histone H4 promoter;Identification of cis-elements regulating the expression of an Arabidopsis histone H4 geneUpstream-27
Motif_419MYB4 binding site motifNot availableUpstream-37
Upstream-44
Upstream-121
Upstream-152
Upstream-260
Motif_426MYB58;MYB63MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in ArabidopsisUpstream-44
Motif_51MYB46Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesisUpstream-37
Upstream-44
Upstream-121
Upstream-152
Motif_618MYB1ATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in ArabidopsisUpstream-35
Motif_666MYB binding site promoterA flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genesUpstream-37
Upstream-44
Motif_85SORLIP5ATone of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Over-represented in both light-induced cotyledon-specific and root-specific genes; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-51