View conserved binding sites


Gene
GM01G33660
Description
3-phosphoshikimate 1-carboxyvinyltransferase
Alias
Glyma01g33660;Glyma01g33660.1;PAC:26325273;Glyma01g33660.1
Binding siteNameDescriptionLocationPosition
Matrix_127AtMYB15More than 80R2R3-MYB regulatory genes in the genome of Arabidopsis thalianaUpstream-147
Upstream-148
Matrix_144AT5G08330;AT5G23280Not availableUpstream-1905
Matrix_179AtMYB84;MYB36;MYB68;O49746_ARATHNot availableUpstream-147
Matrix_211MYB3Not availableUpstream-281
Matrix_299PFG3Not availableUpstream-282
Matrix_315MYB111Not availableUpstream-150
Upstream-151
Matrix_371MYB7;AtMYB6;AtMYB32;ATMYB4Not availableUpstream-151
Upstream-152
Matrix_40TCP2Not availableUpstream-1905
Matrix_401MYB55Not availableUpstream-150
Upstream-151
Matrix_455MYB111Not availableUpstream-150
Upstream-151
Matrix_496ATMYB15Not availableUpstream-147
Upstream-148
Matrix_510AtMYB84More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thalianaUpstream-147
Upstream-148
Motif_104CAREOSREP1CAREs (CAACTC regulatory elements) found in the promoter region of a cystein proteinase (REP-1) gene in riceUpstream-614
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-74
Motif_192BOXLCOREDCPALConsensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitroUpstream-151
Upstream-283
Motif_195TATABOX4TATA box; TATA box found in the 5'upstream region of sweet potato sporamin A gene; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiationDownstream8260
Motif_220ACIIPVPAL2ACII element found at -131 to -120 of bean PAL2 promoter; ACII element is required for vascular-specific gene expression; See also ACIPVPAL2 and ACIIIPVPAL2; Three AC-elements, which are possible Myb protein binding sites, together with a G-box, interact to direct the complex patterns of tissu-specific expression of pAL2 geneUpstream-148
Motif_254MYB46;MYB83MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genesUpstream-151
Upstream-259
Upstream-283
Upstream-340
Motif_292MYBPZMCore of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genesUpstream-151
Upstream-284
Motif_370TATABOX2TATA box; TATA box found in the 5'upstream region of pea legA gene; sporamin A of sweet potato; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiationDownstream8262
Motif_419MYB4 binding site motifNot availableUpstream-151
Upstream-167
Upstream-207
Upstream-283
Upstream-336
Upstream-340
Motif_426MYB58;MYB63MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in ArabidopsisUpstream-151
Motif_49TATAPVTRNALEUTATA-like motif; A TATA-like sequence found in Phaseolus vulgaris tRNALeu gene promoter; Frequently observed upstream of plant tRNA genes; Found in maize glycolytic glyceraldehyde-3-phospate dehydrogenase 4 (GapC4) gene promoter; Binding site of TATA binding protein (TBP)Downstream8261
Motif_503EECCRCAH1EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1Upstream-227
Motif_51MYB46Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesisUpstream-151
Upstream-259
Upstream-282
Upstream-340
Upstream-1599
Motif_666MYB binding site promoterA flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genesUpstream-151
Upstream-340
Upstream-1866
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-59
Upstream-61
Upstream-63
Upstream-65
Motif_85SORLIP5ATone of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Over-represented in both light-induced cotyledon-specific and root-specific genes; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-1992