Matrix_127 | AtMYB15 | More than 80R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana | Upstream | -147 |
| | | Upstream | -148 |
Matrix_144 | AT5G08330;AT5G23280 | Not available | Upstream | -1905 |
Matrix_179 | AtMYB84;MYB36;MYB68;O49746_ARATH | Not available | Upstream | -147 |
Matrix_211 | MYB3 | Not available | Upstream | -281 |
Matrix_299 | PFG3 | Not available | Upstream | -282 |
Matrix_315 | MYB111 | Not available | Upstream | -150 |
| | | Upstream | -151 |
Matrix_371 | MYB7;AtMYB6;AtMYB32;ATMYB4 | Not available | Upstream | -151 |
| | | Upstream | -152 |
Matrix_40 | TCP2 | Not available | Upstream | -1905 |
Matrix_401 | MYB55 | Not available | Upstream | -150 |
| | | Upstream | -151 |
Matrix_455 | MYB111 | Not available | Upstream | -150 |
| | | Upstream | -151 |
Matrix_496 | ATMYB15 | Not available | Upstream | -147 |
| | | Upstream | -148 |
Matrix_510 | AtMYB84 | More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana | Upstream | -147 |
| | | Upstream | -148 |
Motif_104 | CAREOSREP1 | CAREs (CAACTC regulatory elements) found in the promoter region of a cystein proteinase (REP-1) gene in rice | Upstream | -614 |
Motif_116 | INRNTPSADB | Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box | Upstream | -74 |
Motif_192 | BOXLCOREDCPAL | Consensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitro | Upstream | -151 |
| | | Upstream | -283 |
Motif_195 | TATABOX4 | TATA box; TATA box found in the 5'upstream region of sweet potato sporamin A gene; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiation | Downstream | 8260 |
Motif_220 | ACIIPVPAL2 | ACII element found at -131 to -120 of bean PAL2 promoter; ACII element is required for vascular-specific gene expression; See also ACIPVPAL2 and ACIIIPVPAL2; Three AC-elements, which are possible Myb protein binding sites, together with a G-box, interact to direct the complex patterns of tissu-specific expression of pAL2 gene | Upstream | -148 |
Motif_254 | MYB46;MYB83 | MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes | Upstream | -151 |
| | | Upstream | -259 |
| | | Upstream | -283 |
| | | Upstream | -340 |
Motif_292 | MYBPZM | Core of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genes | Upstream | -151 |
| | | Upstream | -284 |
Motif_370 | TATABOX2 | TATA box; TATA box found in the 5'upstream region of pea legA gene; sporamin A of sweet potato; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiation | Downstream | 8262 |
Motif_419 | MYB4 binding site motif | Not available | Upstream | -151 |
| | | Upstream | -167 |
| | | Upstream | -207 |
| | | Upstream | -283 |
| | | Upstream | -336 |
| | | Upstream | -340 |
Motif_426 | MYB58;MYB63 | MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in Arabidopsis | Upstream | -151 |
Motif_49 | TATAPVTRNALEU | TATA-like motif; A TATA-like sequence found in Phaseolus vulgaris tRNALeu gene promoter; Frequently observed upstream of plant tRNA genes; Found in maize glycolytic glyceraldehyde-3-phospate dehydrogenase 4 (GapC4) gene promoter; Binding site of TATA binding protein (TBP) | Downstream | 8261 |
Motif_503 | EECCRCAH1 | EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1 | Upstream | -227 |
Motif_51 | MYB46 | Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesis | Upstream | -151 |
| | | Upstream | -259 |
| | | Upstream | -282 |
| | | Upstream | -340 |
| | | Upstream | -1599 |
Motif_666 | MYB binding site promoter | A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes | Upstream | -151 |
| | | Upstream | -340 |
| | | Upstream | -1866 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -59 |
| | | Upstream | -61 |
| | | Upstream | -63 |
| | | Upstream | -65 |
Motif_85 | SORLIP5AT | one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Over-represented in both light-induced cotyledon-specific and root-specific genes; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data | Upstream | -1992 |