View conserved binding sites


Gene
GM01G31921
Description
WRKY transcription factor 33
Alias
Glyma01g31921;Glyma01g31921.1;PAC:26323633;Glyma01g31921.1
Binding siteNameDescriptionLocationPosition
Matrix_148WRKY60Not availableUpstream-186
Upstream-187
Matrix_224ERF1Not availableUpstream-319
Matrix_25AP3Not availableUpstream-1129
Matrix_261ATERF-1Not availableUpstream-320
Matrix_287ERF2Not availableUpstream-320
Matrix_295ERF1Not availableUpstream-320
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-319
Matrix_329WRKY12Not availableUpstream-186
Matrix_334AT3G23230Not availableUpstream-321
Matrix_355ERF10;ERF11Not availableUpstream-319
Matrix_360ORA59Not availableUpstream-320
Matrix_363RAP2.3Not availableUpstream-319
Matrix_39AP1Not availableUpstream-76
Upstream-77
Matrix_426CRF1;CRF2Not availableUpstream-321
Matrix_48PINot availableUpstream-78
Upstream-79
Matrix_50ATERF14;AT5G43410Not availableUpstream-319
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-321
Motif_168IBOXI box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated geneUpstream-108
Motif_181IBOXCORENTI-box core motif in the CAMs (conserved DNA modular arrays) associated with light-responsive promoter regionsUpstream-108
Motif_216PYRIMIDINEBOXHVEPB1Pyrimidine box found in the barley EPB-1 (cysteine proteinase) gene promoter; Located between -120 to -113; Required for GA inductionUpstream-871
Motif_270ELRECOREPCRP1ElRE (Elicitor Responsive Element) core of parsley PR1 genes; consensus sequence of elements W1 and W2 of parsley PR1-1 and PR1-2 promoters; Box W1 and W2 are the binding site of WRKY1 and WRKY2, respectively; ERE; WA box; One of the W boxes found in the Parsley WRKY1 gene promoter; Required for elicitor responsiveness; WC box WB box and WC box constitute a palindrome; WRKY1 protein binding site; W-box found in thioredoxin h5 gene in ArabidopsisUpstream-182
Upstream-189
Upstream-219
Motif_309GATA promoter motifArabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristicsUpstream-107
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-320
Motif_320AGCBOXNPGLBAGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC boxUpstream-320
Motif_348WBBOXPCWRKY1WB box; WRKY proteins bind specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box; Found in amylase gene in sweet potato, alpha-Amy2 genes in wheat, barley, and wild oat, PR1 gene in parsley, and a transcription factor gene in ArabidopsisUpstream-188
Upstream-235
Upstream-1076
Motif_375ERELEE4ERE (ethylene responsive element) of tomato E4 and carnation GST1 genes; GST1 is related to senescence; Found in the 5'-LTR region of TLC1.1 retrotransposon family in Lycopersicon chilense; ERE motifs mediate ethylene-induced activation of the U3 promoter regionUpstream-61
Upstream-926
Upstream-1204
Motif_437ANAERO2CONSENSUSOne of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1)Upstream-158
Motif_59CEREGLUBOX3PSLEGAcereal glutenin box in pea (P.s.) legumin gene (legA); sequence homologous to the cereal glutenin gene control elementsUpstream-509
Motif_639WRKY18Identification of genes encoding receptor-like protein kinases as possible targets of pathogen- and salicylic acid-induced WRKY DNA-binding proteins in ArabidopsisUpstream-236
Motif_98SEF3MOTIFGMSEF3 binding site; Soybean consensus sequence found in the 5' upstream region of beta-conglycinin (7S globulin) gene; AACCCA(-27bp-)AACCCA; SEF=soybean embryo factor; SEF2; SEF3; SEF4Upstream-231