View conserved binding sites


Gene
GM01G00280
Description
II stability/assembly factor HCF136, chloroplastic
Alias
Glyma01g00280;Glyma01g00280.1;PAC:26324416;Glyma01g00280.1
Binding siteNameDescriptionLocationPosition
Motif_168IBOXI box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated geneUpstream-672
Upstream-700
Motif_174SREATMSDsugar-repressive element (SRE) found in 272 of the 1592 down-regulated genes after main stem decapitation in ArabidopsisUpstream-484
Upstream-1666
Upstream-1972
Motif_181IBOXCORENTI-box core motif in the CAMs (conserved DNA modular arrays) associated with light-responsive promoter regionsUpstream-671
Upstream-700
Motif_182MYB2CONSENSUSATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22Upstream-1526
Upstream-1885
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisUpstream-141
Upstream-875
Upstream-1526
Upstream-1885
Motif_279POLASIG3Plant polyA signal; Consensus sequence for plant polyadenylation signalUpstream-275
Upstream-283
Upstream-351
Upstream-522
Upstream-882
Motif_336MYBMOUSEBinding site for mouse c-myb proteinUpstream-1526
Upstream-1885
Motif_85SORLIP5ATone of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Over-represented in both light-induced cotyledon-specific and root-specific genes; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-168