Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -461 |
Matrix_109 | GBF3 | Not available | Upstream | -461 |
| | | Upstream | -463 |
Matrix_113 | ABI5 | Not available | Upstream | -461 |
| | | Upstream | -463 |
Matrix_118 | PIF3_2 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -440 |
| | | Upstream | -458 |
| | | Upstream | -459 |
Matrix_122 | ABF1;AREB2 | Not available | Upstream | -461 |
Matrix_129 | ABF1 | Not available | Upstream | -462 |
Matrix_14 | ZCW32;AT5G62610 | Not available | Upstream | -445 |
| | | Upstream | -462 |
| | | Upstream | -463 |
Matrix_15 | PIF3_1 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -458 |
Matrix_156 | POC1 | Not available | Upstream | -445 |
| | | Upstream | -461 |
| | | Upstream | -463 |
Matrix_192 | FHY3/FAR1 | Not available | Upstream | -459 |
| | | Upstream | -463 |
Matrix_200 | PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815 | Not available | Upstream | -462 |
Matrix_214 | AP1 | Not available | Upstream | -442 |
| | | Upstream | -460 |
Matrix_24 | POC1 | Not available | Upstream | -458 |
Matrix_247 | PIF3 | Not available | Upstream | -444 |
| | | Upstream | -462 |
Matrix_296 | GBF2 | Not available | Upstream | -462 |
| | | Upstream | -463 |
Matrix_300 | bZIP68;bZIP16 | Not available | Upstream | -462 |
| | | Upstream | -463 |
Matrix_301 | PIL5 | Not available | Upstream | -457 |
| | | Upstream | -463 |
Matrix_305 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -442 |
Matrix_331 | GBF1 | Not available | Upstream | -461 |
| | | Upstream | -463 |
Matrix_332 | SPT;ALC | Not available | Upstream | -445 |
| | | Upstream | -462 |
| | | Upstream | -463 |
Matrix_345 | POC1 | Not available | Upstream | -440 |
| | | Upstream | -458 |
| | | Upstream | -459 |
Matrix_356 | PRR5 | Not available | Upstream | -455 |
| | | Upstream | -459 |
Matrix_389 | ILR3 | Not available | Upstream | -462 |
Matrix_403 | BZR1 | Not available | Upstream | -460 |
Matrix_443 | AGL15 | Not available | Upstream | -460 |
Matrix_448 | ATERF6 | Not available | Upstream | -27 |
Matrix_55 | PIF3 | Not available | Upstream | -443 |
| | | Upstream | -461 |
Matrix_7 | PIF4 | Not available | Upstream | -462 |
| | | Upstream | -464 |
Matrix_77 | PRR5 | Not available | Upstream | -460 |
| | | Upstream | -461 |
Motif_165 | AP3SV40 | AP-3 binding site consensus sequence in enhancer regions of SV40, MMTV, MLV, IL2 | Upstream | -352 |
Motif_174 | SREATMSD | sugar-repressive element (SRE) found in 272 of the 1592 down-regulated genes after main stem decapitation in Arabidopsis | Upstream | -355 |
Motif_179 | CACGTGMOTIF;BES1;PIF4;PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -445 |
| | | Upstream | -463 |
Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -131 |
| | | Upstream | -132 |
| | | Upstream | -444 |
| | | Upstream | -445 |
| | | Upstream | -462 |
| | | Upstream | -463 |
Motif_244 | ABRE-like binding site motif | Not available | Upstream | -443 |
| | | Upstream | -461 |
| | | Upstream | -463 |
Motif_279 | POLASIG3 | Plant polyA signal; Consensus sequence for plant polyadenylation signal | Upstream | -297 |
| | | Upstream | -300 |
| | | Upstream | -303 |
| | | Upstream | -306 |
Motif_307 | TATCCAYMOTIFOSRAMY3D | TATCCAY motif found in rice RAmy3D alpha-amylase gene promoter; a GATA motif as its antisense sequence; TATCCAY motif and G motif are responsible for sugar repression | Upstream | -353 |
| | | Upstream | -1637 |
Motif_339 | ABRE-like binding site motif | Molecular responses to dehydration and low temperature | Upstream | -445 |
| | | Upstream | -463 |
Motif_410 | ANAERO1CONSENSUS | One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO1CONSENSUS by the PLACEdb curator | Upstream | -537 |
Motif_448 | IRO2OS | OsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiency | Upstream | -444 |
| | | Upstream | -445 |
| | | Upstream | -462 |
| | | Upstream | -463 |
Motif_473 | ABREOSRGA1 | ABRE (ABA responsive element) in rice RGA1 encoding a G protein alpha subunit;ABRE; ABA and water-stress responses; Found in maize rab28; maize rab28 is ABA-inducible in embryos and vegetative tissues; Found in the Arabidopsis (A.t.) alcohol dehydrogenase (Adh) gene promoter; ABRE2; Found in the maize (Z.m.) Cat1 gene promoter; Responsible for the induction by ABA; Binding site of CBF2; Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance; The CBF genes do not appear to be autoregulated through the CRT/DRE sequence;The cis-regulatory element CCACGTGG is involved in ABA and water-stress responses of the maize gene rab28. Characterization of a maize G-box binding factor that is induced by hypoxia | Upstream | -444 |
| | | Upstream | -462 |
Motif_543 | TATCCACHVAL21 | TATCCAC box is a part of the conserved cis-acting response complex (GARC) that most often contain three sequence motifs, the TAACAAA box, or GA-responsive element (GARE); the pyrimidine box, CCTTTT (see S000259); and the TATCCAC box, which are necessary for a full GA response | Upstream | -353 |
Motif_558 | BOXIIPCCHS | Core of Box II/G box found in the parsley chs genes; Essential for light regulation | Upstream | -461 |
| | | Upstream | -464 |
Motif_57 | ABREOSRAB21 | ABA responsive element (ABRE) of wheat Em and rice rab21 genes; Proposed consensus sequence for the repeated motif (Em1a and Em1b) of wheat Em gene | Upstream | -460 |
Motif_609 | AP2 | The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence element | Upstream | -537 |
Motif_627 | ACGTABREMOTIFA2OSEM | Experimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis | Upstream | -461 |
| | | Upstream | -464 |
Motif_628 | TATCCAOSAMY | TATCCA element found in alpha-amylase promoters of rice at positions ca.90 to 150bp upstream of the transcription start sites; Binding sites of OsMYBS1, OsMYBS2 and OsMYBS3 which mediate sugar and hormone regulation of alpha-amylase gene expression; See also AMYBOX2 | Upstream | -354 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -552 |
Motif_672 | AP2 | The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence element | Upstream | -537 |
Motif_684 | MNF1ZMPPC1 | MNF1 binding site in maize Ppc1 (phosphoenolpyruvate carboxylase) gene promoter; Involved in light induction | Upstream | -531 |