View conserved binding sites


Gene
EG0006G11840
Description
CTP synthase
Alias
Eucgr.F01480;Eucgr.F01480.1;PAC:23582173;Eucgr.F01480.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-475
Matrix_110ATABI4;AT3G57600Not availableUpstream-490
Matrix_115AGL15Not availableUpstream-225
Matrix_119RRTF1Not availableUpstream-474
Matrix_138RRTF1Not availableUpstream-474
Matrix_146ORA47Not availableUpstream-1330
Matrix_147ERF3;AT1G80580Not availableUpstream-473
Matrix_224ERF1Not availableUpstream-474
Matrix_234RAP2.3Not availableUpstream-475
Matrix_252RAP2.6Not availableUpstream-475
Matrix_261ATERF-1Not availableUpstream-474
Matrix_272DEAR4Not availableUpstream-1330
Matrix_287ERF2Not availableUpstream-475
Matrix_288RAP2.3Not availableUpstream-474
Matrix_295ERF1Not availableUpstream-473
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-474
Matrix_334AT3G23230Not availableUpstream-474
Matrix_343AT2G33710Not availableUpstream-475
Matrix_355ERF10;ERF11Not availableUpstream-474
Matrix_360ORA59Not availableUpstream-1527
Matrix_363RAP2.3Not availableUpstream-474
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-474
Matrix_378ATERF1Not availableUpstream-475
Matrix_406ATERF-7Not availableUpstream-473
Matrix_426CRF1;CRF2Not availableUpstream-474
Matrix_45DRNNot availableUpstream-473
Matrix_462ATERF-8Not availableUpstream-473
Matrix_473RRTF1Not availableUpstream-475
Matrix_484ATERF13Not availableUpstream-473
Matrix_493AT1G22985;AT1G71130Not availableUpstream-474
Matrix_50ATERF14;AT5G43410Not availableUpstream-474
Matrix_506DRNL;ATERF-4Not availableUpstream-474
Matrix_517ERF12Not availableUpstream-473
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-474
Matrix_84AtGRF6Not availableUpstream-1688
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-474
Matrix_91CRF3Not availableUpstream-474
Motif_168IBOXI box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated geneUpstream-256
Motif_181IBOXCORENTI-box core motif in the CAMs (conserved DNA modular arrays) associated with light-responsive promoter regionsUpstream-257
Motif_309GATA promoter motifArabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristicsUpstream-382
Upstream-255
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-472
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-99
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-1285
Upstream-1283