View conserved binding sites


Gene
EG0005G12740
Description
Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase
Alias
Eucgr.E01545;Eucgr.E01545.1;PAC:23578251;Eucgr.E01545.1
Binding siteNameDescriptionLocationPosition
Matrix_134ABF1Not availableIntron9976
Intron9975
Intron9974
Intron9973
Intron9972
Intron9971
Intron9970
Matrix_352LEC2Not availableIntron9394
Intron5320
Matrix_372ANAC81DNA binding specificity of ATAF2, a NAC domain transcription factor targeted for degradation by Tobacco mosaic virusIntron9981
Intron9980
Intron9979
Motif_441GAGA8HVBKN3GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBRIntron3230
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Intron9976
Intron9975
Intron9974
Intron9973
Intron9972
Upstream-200
Upstream-201
Upstream-202
Upstream-203
Upstream-204
Upstream-205
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionIntron9967
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionIntron9967
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAIntron3231
Intron3229
Intron3227
Intron3225
Intron3223
Motif_94UP1ATMSDUp1 motif found in 162 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-129