View conserved binding sites


Gene
EG0002G29690
Description
protein ligase At3g02290
Alias
Eucgr.B03564;Eucgr.B03564.1;PAC:23568918;Eucgr.B03564.1
Binding siteNameDescriptionLocationPosition
Matrix_92AT1G33760Not availableUpstream-1337
Motif_223LTRE1HVBLT49LTRE-1 (low-temperature-responsive element) in barley (H.v.) blt4.9 gene promoter; A new LTRE; A previously known LTRE is CCGACUpstream-744
Upstream-1137
Upstream-1768
Upstream-1821
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGADownstream2072
Downstream2070
Downstream2068
Motif_98SEF3MOTIFGMSEF3 binding site; Soybean consensus sequence found in the 5' upstream region of beta-conglycinin (7S globulin) gene; AACCCA(-27bp-)AACCCA; SEF=soybean embryo factor; SEF2; SEF3; SEF4Upstream-460
Upstream-572
Upstream-952