View conserved binding sites


Gene
EG0002G17400
Description
Transcription factor HY5-like
Alias
Eucgr.B02198;Eucgr.B02198.1;PAC:23567298;Eucgr.B02198.1
Binding siteNameDescriptionLocationPosition
Matrix_288RAP2.3Not availableUpstream-188
Matrix_363RAP2.3Not availableUpstream-188
Matrix_378ATERF1Not availableUpstream-187
Matrix_50ATERF14;AT5G43410Not availableUpstream-188
Motif_141BP5OSWXOsBP-5 (a MYC protein) binding site in Wx promoterUpstream-172
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-171
Motif_22RYREPEATLEGUMINBOXRY repeat (CATGCAY) or legumin box found in seed-storage protein genes in legume such as soybeanUpstream-179
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-190
Motif_320AGCBOXNPGLBAGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC boxUpstream-189
Motif_349QARBNEXTAQAR (quantitative activator region) in promoter region of Brassica napus extA extensin geneUpstream-171
Motif_402AtTINY2Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thalianaUpstream-188
Motif_50AtERF-7;AtERF-4;AtERF-3;AtERF-1;AtERF-2;AtERF-5Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responsesUpstream-188
Motif_511RYREPEATGMGY2RY repeat motif (CATGCAT); Present in the 5' region of the soybean glycinin gene (Gy2)Upstream-179
Motif_518SPHCOREZMC1Core of Sph element; Core motif of Sph element in maize C1 gene to which maize VP1 (viviparous 1) protein binds; VP1-responsive element; see RYREPEAT4; VP1 gene is specifically required for expression of the maturation program in seed development; VP1 is a novel transcription factor possibly involved in potentiation of a seed-specific hormone responseUpstream-179
Motif_567T/GBOXATPIN2T/G-box found in tomato proteinase inhibitor II (pin2) and leucine aminopeptidase (LAP) genes; Involved in jasmonate (JA) induction of these genes; bHLH-Leu zipper JAMYC2 and JAMYC10 proteins specifically recognize this motifUpstream-172
Motif_640RYREPEATBNNAPARY repeat found in RY/G box (the complex containing the two RY repeats and the G-box) of napA gene in Brassica napus; Found between -78 and -50; Required for seed specific expression;dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABREUpstream-180
Motif_70CANBNNAPACore of (CA)n element in storage protein genes in Brasica napus; embryo- and endosperm-specific transcription of napin (storage protein) gene, napA; seed specificity; activator and repressorUpstream-168