Matrix_101 | ERF5 | Not available | Upstream | -1061 |
Matrix_110 | ATABI4;AT3G57600 | Not available | Upstream | -1065 |
Matrix_119 | RRTF1 | Not available | Upstream | -1060 |
Matrix_146 | ORA47 | Not available | Upstream | -1064 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -1059 |
Matrix_151 | ASIL1 | Not available | Upstream | -1060 |
Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -1060 |
Matrix_178 | HSFB2A | Not available | Upstream | -1485 |
Matrix_190 | ATERF1 | Not available | Upstream | -1065 |
| | | Upstream | -1064 |
Matrix_217 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Downstream | 9375 |
Matrix_224 | ERF1 | Not available | Upstream | -1063 |
Matrix_230 | ARR11 | Not available | Upstream | -1066 |
Matrix_234 | RAP2.3 | Not available | Upstream | -1064 |
Matrix_243 | RAP2.12;RAP2.2 | Not available | Upstream | -1060 |
Matrix_252 | RAP2.6 | Not available | Upstream | -1065 |
| | | Upstream | -1064 |
Matrix_261 | ATERF-1 | Not available | Upstream | -1060 |
Matrix_272 | DEAR4 | Not available | Upstream | -1064 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -1060 |
Matrix_334 | AT3G23230 | Not available | Upstream | -1060 |
Matrix_343 | AT2G33710 | Not available | Upstream | -1064 |
| | | Upstream | -1061 |
Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -1059 |
Matrix_350 | ARR14 | Not available | Upstream | -1066 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -1060 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -1060 |
Matrix_378 | ATERF1 | Not available | Upstream | -1064 |
Matrix_406 | ATERF-7 | Not available | Upstream | -1059 |
Matrix_433 | ATERF1 | Not available | Upstream | -1060 |
Matrix_439 | AP3 | Not available | Upstream | -1014 |
Matrix_448 | ATERF6 | Not available | Upstream | -1060 |
Matrix_45 | DRN | Not available | Upstream | -1059 |
Matrix_462 | ATERF-8 | Not available | Upstream | -1059 |
Matrix_466 | PRR5 | Not available | Upstream | -976 |
Matrix_473 | RRTF1 | Not available | Upstream | -1064 |
Matrix_484 | ATERF13 | Not available | Upstream | -1059 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -1060 |
Matrix_5 | AT5G51190;ERF104 | Not available | Upstream | -1059 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -1060 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -1060 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -1060 |
Matrix_91 | CRF3 | Not available | Upstream | -1060 |
Motif_1 | GT1CORE | Critical for GT-1 binding to box II of rbcS; Transcriptional activation by Arabidopsis GT-1 may be through interaction with TFIIA-TBP-TATA complex | Upstream | -1001 |
Motif_104 | CAREOSREP1 | CAREs (CAACTC regulatory elements) found in the promoter region of a cystein proteinase (REP-1) gene in rice | Upstream | -982 |
Motif_116 | INRNTPSADB | Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box | Upstream | -996 |
Motif_171 | TCP binding consensus | found enriched in peaks in chip-seq data for SEP3 | Upstream | -972 |
Motif_182 | MYB2CONSENSUSAT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22 | Upstream | -1053 |
Motif_221 | MYBCORE | Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis | Upstream | -1053 |
Motif_292 | MYBPZM | Core of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genes | Upstream | -919 |
Motif_309 | GATA promoter motif | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | Upstream | -932 |
Motif_329 | AMMORESIIUDCRNIA1 | Motifs (IIU and IID) found in the Chlamydomonas Nia1 gene promoter; Involved in ammonium-response; Located between -231 and -219 and also between -76 and -65; Involved in Nia1 transcription activation | Upstream | -921 |
Motif_336 | MYBMOUSE | Binding site for mouse c-myb protein | Upstream | -1053 |
Motif_383 | UPRE-III(bZIP60) | The plant-specific transcription factor NAC103 is induced by bZIP60 through a new cis-regulatory element to modulate the unfolded protein response in Arabidopsis | Upstream | -986 |
Motif_411 | PRECONSCRHSP70A | Consensus sequence of PRE (plastid response element) in the promoters of HSP70A in Chlamydomonas; Involved in induction of HSP70A gene by both MgProto and light | Upstream | -1056 |
Motif_503 | EECCRCAH1 | EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1 | Upstream | -1045 |
Motif_584 | UPRE-III(bZIP60) | The plant-specific transcription factor NAC103 is induced by bZIP60 through a new cis-regulatory element to modulate the unfolded protein response in Arabidopsis | Upstream | -986 |
Motif_585 | ATB2/AtbZIP53/AtbZIP44/GBF5 BS in ProDH | PRE (Pro- or hypoosmolarity-responsive element) found in the promoter region of proline dehydrogenase (ProDH) gene in Arabidopsis; Core of 9-bp sequence ACTCATCCT which is necessary for the efficient expression of ProDH in response to L-Pro and hypoosmolarity; ATB2-binding site; Similar to GCN4 motif (ATGA(C/G)TCAT); ATB2 subgroup of bZIP transcription factors function as transcriptional activator for hypoosmolarity-inducible ProDH; A Novel Subgroup of bZIP Proteins Functions as Transctiptional Activators in Hypsosmolarity-Responsive Expression of the ProDH gene in Arabidopsis | Upstream | -984 |
Motif_686 | LFY | Structural basis for LEAFY floral switch function and similarity with helix-turn-helix proteins | Upstream | -199 |