View conserved binding sites


Gene
CM01595G02000
Description
terminal ear1 homolog
Alias
MELO3C003062;MELO3C003062T1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-264
Matrix_147ERF3;AT1G80580Not availableUpstream-264
Matrix_224ERF1Not availableUpstream-263
Matrix_234RAP2.3Not availableUpstream-264
Matrix_287ERF2Not availableUpstream-264
Matrix_288RAP2.3Not availableUpstream-263
Matrix_295ERF1Not availableUpstream-264
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-263
Matrix_334AT3G23230Not availableUpstream-264
Upstream-265
Matrix_343AT2G33710Not availableUpstream-264
Matrix_355ERF10;ERF11Not availableUpstream-263
Matrix_360ORA59Not availableUpstream-264
Matrix_363RAP2.3Not availableUpstream-263
Matrix_378ATERF1Not availableUpstream-264
Matrix_406ATERF-7Not availableUpstream-262
Matrix_426CRF1;CRF2Not availableUpstream-264
Upstream-265
Matrix_45DRNNot availableUpstream-264
Matrix_462ATERF-8Not availableUpstream-262
Matrix_473RRTF1Not availableUpstream-264
Matrix_484ATERF13Not availableUpstream-264
Matrix_493AT1G22985;AT1G71130Not availableUpstream-264
Matrix_50ATERF14;AT5G43410Not availableUpstream-263
Matrix_506DRNL;ATERF-4Not availableUpstream-264
Upstream-265
Matrix_517ERF12Not availableUpstream-264
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-264
Upstream-265
Matrix_91CRF3Not availableUpstream-264
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-22
Motif_285HDZIP2ATATHB2Binding site of the Arabidopsis homeobox gene (ATHB-2) found in its own promoter; Located between -72 and -80; Similar to the HD-ZIP-2 binding consensus sequence; ATHB-2 is regulated by light signals which function as a negative autoregulator of its own geneUpstream-1625
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-264
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-21