View conserved binding sites


Gene
CM00081G00180
Description
Ethylene-responsive transcription factor
Alias
MELO3C025608;MELO3C025608T1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-340
Upstream-343
Matrix_110ATABI4;AT3G57600Not availableUpstream-345
Matrix_190ATERF1Not availableUpstream-343
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-377
Matrix_224ERF1Not availableUpstream-341
Matrix_243RAP2.12;RAP2.2Not availableUpstream-344
Matrix_252RAP2.6Not availableUpstream-340
Matrix_261ATERF-1Not availableUpstream-341
Matrix_287ERF2Not availableUpstream-340
Matrix_295ERF1Not availableUpstream-342
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-341
Upstream-344
Matrix_334AT3G23230Not availableUpstream-341
Matrix_343AT2G33710Not availableUpstream-340
Upstream-343
Matrix_348AT5G51910Not availableUpstream-369
Upstream-371
Matrix_355ERF10;ERF11Not availableUpstream-341
Upstream-344
Matrix_360ORA59Not availableUpstream-342
Matrix_363RAP2.3Not availableUpstream-341
Matrix_374AT5G07580;AT5G61590Not availableUpstream-341
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-344
Matrix_378ATERF1Not availableUpstream-340
Matrix_406ATERF-7Not availableUpstream-342
Matrix_409DEAR3Not availableUpstream-341
Upstream-344
Matrix_426CRF1;CRF2Not availableUpstream-341
Upstream-344
Matrix_45DRNNot availableUpstream-342
Matrix_462ATERF-8Not availableUpstream-342
Matrix_467RAV1Not availableUpstream-376
Matrix_477RAV1Not availableUpstream-376
Matrix_480BES1Not availableUpstream-211
Upstream-212
Upstream-361
Upstream-364
Matrix_484ATERF13Not availableUpstream-342
Matrix_493AT1G22985;AT1G71130Not availableUpstream-341
Upstream-344
Matrix_50ATERF14;AT5G43410Not availableUpstream-341
Matrix_506DRNL;ATERF-4Not availableUpstream-341
Upstream-344
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-341
Upstream-344
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-344
Matrix_91CRF3Not availableUpstream-341
Upstream-344
Motif_153MARABOX1A-box found in SAR(scaffold attachment region; or matrix attachment region, MAR)Upstream-620
Upstream-624
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-342
Motif_321TATABOX5TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysisUpstream-619
Upstream-623
Upstream-627
Motif_342POLASIG1PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in ArabidopsisUpstream-620
Upstream-624
Upstream-628
Motif_667TATABOXOSPALBinding site for OsTBP2, found in the promoter of rice pal gene encoding phenylalanine ammonia-lyase; OsTFIIB stimulated the DNA binding and bending activities of OsTBP2 and synergistically enhanced OsTBP2-mediated transcription from the pal promoterUpstream-617
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-21