View conserved binding sites


Gene
CM00076G00100
Description
No description available
Alias
MELO3C025212;MELO3C025212T1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-242
Matrix_138RRTF1Not availableUpstream-313
Matrix_147ERF3;AT1G80580Not availableUpstream-76
Upstream-77
Matrix_181Dof5.7Not availableUpstream-207
Matrix_190ATERF1Not availableUpstream-76
Upstream-77
Matrix_224ERF1Not availableUpstream-75
Upstream-76
Upstream-241
Matrix_234RAP2.3Not availableUpstream-77
Upstream-78
Matrix_243RAP2.12;RAP2.2Not availableUpstream-75
Matrix_252RAP2.6Not availableUpstream-77
Upstream-78
Matrix_261ATERF-1Not availableUpstream-242
Matrix_287ERF2Not availableUpstream-74
Upstream-75
Upstream-242
Matrix_295ERF1Not availableUpstream-76
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-78
Upstream-79
Upstream-241
Matrix_334AT3G23230Not availableUpstream-243
Matrix_343AT2G33710Not availableUpstream-77
Upstream-78
Upstream-242
Matrix_344ATERF15;AT4G18450Not availableUpstream-76
Matrix_355ERF10;ERF11Not availableUpstream-241
Matrix_360ORA59Not availableUpstream-76
Upstream-77
Upstream-242
Matrix_374AT5G07580;AT5G61590Not availableUpstream-75
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-242
Matrix_378ATERF1Not availableUpstream-77
Upstream-78
Matrix_405DREB2CNot availableUpstream-76
Upstream-77
Upstream-243
Matrix_406ATERF-7Not availableUpstream-76
Upstream-77
Matrix_414AGL15Not availableUpstream-280
Matrix_426CRF1;CRF2Not availableUpstream-78
Upstream-79
Upstream-243
Matrix_45DRNNot availableUpstream-76
Upstream-77
Matrix_47AtMYB77Not availableUpstream-61
Matrix_473RRTF1Not availableUpstream-77
Upstream-78
Matrix_484ATERF13Not availableUpstream-76
Upstream-77
Upstream-242
Matrix_493AT1G22985;AT1G71130Not availableUpstream-78
Upstream-79
Upstream-242
Matrix_5AT5G51190;ERF104Not availableUpstream-76
Matrix_50ATERF14;AT5G43410Not availableUpstream-75
Upstream-76
Upstream-241
Matrix_506DRNL;ATERF-4Not availableUpstream-78
Upstream-79
Upstream-243
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-75
Upstream-76
Upstream-78
Upstream-79
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-243
Matrix_91CRF3Not availableUpstream-78
Upstream-79
Upstream-242
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-77
Motif_317GAREATGARE (GA-responsive element); Occurrence of GARE in GA-inducible, GA-responsible, and GA-nonresponsive genes found in Arabidopsis seed germination was 20, 18, and 12%, respectivelyDownstream9140
Motif_353HEXAMERATH4hexamer motif of Arabidopsis thaliana histone H4 promoter;Identification of cis-elements regulating the expression of an Arabidopsis histone H4 geneUpstream-63
Upstream-94
Motif_520AMYBOX1amylase box; Conserved sequence found in 5'-upstream region of alpha-amylase gene of rice, wheat, barleyDownstream9140
Motif_591CBFHVBinding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs)Upstream-92
Motif_609AP2The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence elementDownstream9140
Motif_614MYBGAHVCentral element of gibberellin (GA) response complex (GARC) in high-pI alpha-amylase gene in barley; Similar to c-myb and v-myb consensus binding site; GAmyb binds specifically to the TAACAAA box in vitro; GAmyb is the sole GA-regulated transcriptional factor required for transcriptional activation of the high-pI alpha-amylase; GARC consist of the pyrimidine, TAACAAA and TATCCAC boxes; GARE in RAmy1A gene; GARE and pyrimidine box in RAmy1A are partially involved in sugar repressionDownstream9140
Motif_672AP2The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence elementDownstream9140