View conserved binding sites


Gene
CM00070G00700
Description
dihydrouridine(16/17) synthase [NAD(P)(+)]-like
Alias
MELO3C024784;MELO3C024784T1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-31
Upstream-32
Matrix_110ATABI4;AT3G57600Not availableUpstream-33
Upstream-34
Matrix_147ERF3;AT1G80580Not availableUpstream-33
Upstream-34
Matrix_190ATERF1Not availableUpstream-33
Upstream-34
Matrix_224ERF1Not availableUpstream-32
Upstream-33
Upstream-35
Upstream-36
Matrix_234RAP2.3Not availableUpstream-31
Upstream-32
Upstream-34
Upstream-35
Matrix_252RAP2.6Not availableUpstream-31
Upstream-32
Upstream-34
Upstream-35
Matrix_261ATERF-1Not availableUpstream-32
Upstream-33
Matrix_272DEAR4Not availableUpstream-31
Upstream-32
Matrix_287ERF2Not availableUpstream-31
Upstream-32
Matrix_295ERF1Not availableUpstream-33
Upstream-34
Matrix_321HRDNot availableUpstream-32
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-32
Upstream-33
Upstream-35
Upstream-36
Matrix_334AT3G23230Not availableUpstream-32
Upstream-33
Matrix_343AT2G33710Not availableUpstream-31
Upstream-32
Upstream-34
Upstream-35
Matrix_344ATERF15;AT4G18450Not availableUpstream-33
Upstream-34
Matrix_355ERF10;ERF11Not availableUpstream-32
Upstream-33
Upstream-35
Upstream-36
Matrix_360ORA59Not availableUpstream-33
Upstream-34
Matrix_363RAP2.3Not availableUpstream-32
Upstream-33
Matrix_374AT5G07580;AT5G61590Not availableUpstream-32
Upstream-33
Upstream-34
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-32
Upstream-33
Matrix_378ATERF1Not availableUpstream-31
Upstream-32
Upstream-34
Upstream-35
Matrix_406ATERF-7Not availableUpstream-33
Upstream-34
Matrix_409DEAR3Not availableUpstream-32
Upstream-33
Matrix_426CRF1;CRF2Not availableUpstream-32
Upstream-33
Upstream-35
Upstream-36
Matrix_45DRNNot availableUpstream-33
Upstream-34
Upstream-36
Upstream-37
Matrix_454AT1G77200;ATERF38;AT4G16750;AT5G52020Not availableUpstream-32
Upstream-33
Matrix_462ATERF-8Not availableUpstream-33
Upstream-34
Matrix_473RRTF1Not availableUpstream-31
Upstream-32
Upstream-34
Upstream-35
Matrix_484ATERF13Not availableUpstream-33
Upstream-34
Matrix_493AT1G22985;AT1G71130Not availableUpstream-32
Upstream-33
Upstream-35
Upstream-36
Matrix_50ATERF14;AT5G43410Not availableUpstream-32
Upstream-33
Matrix_506DRNL;ATERF-4Not availableUpstream-32
Upstream-33
Upstream-35
Upstream-36
Matrix_517ERF12Not availableUpstream-33
Upstream-34
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-32
Upstream-33
Upstream-35
Upstream-36
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-32
Upstream-33
Matrix_91CRF3Not availableUpstream-32
Upstream-33
Upstream-35
Upstream-36
Motif_15AMYBOX2amylase box; amylase element; Conserved sequence found in 5'upstream region of alpha-amylase gene of rice, wheat, barleyUpstream-16
Motif_307TATCCAYMOTIFOSRAMY3DTATCCAY motif found in rice RAmy3D alpha-amylase gene promoter; a GATA motif as its antisense sequence; TATCCAY motif and G motif are responsible for sugar repressionUpstream-16
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-34
Motif_383UPRE-III(bZIP60)The plant-specific transcription factor NAC103 is induced by bZIP60 through a new cis-regulatory element to modulate the unfolded protein response in ArabidopsisUpstream-8
Motif_584UPRE-III(bZIP60)The plant-specific transcription factor NAC103 is induced by bZIP60 through a new cis-regulatory element to modulate the unfolded protein response in ArabidopsisUpstream-8
Motif_603SITEIIATCYTCSite II element found in the promoter regions of cytochrome genes (Cytc-1, Cytc-2) in Arabidopsis; Located between -147 and -156 from the translational starts sites;Overrepresented in the promoters of nuclear genes encoding components of the oxidative phosphorylation (OxPhos) machinery from both Arabidopsis and riceUpstream-26
Motif_628TATCCAOSAMYTATCCA element found in alpha-amylase promoters of rice at positions ca.90 to 150bp upstream of the transcription start sites; Binding sites of OsMYBS1, OsMYBS2 and OsMYBS3 which mediate sugar and hormone regulation of alpha-amylase gene expression; See also AMYBOX2Upstream-17