Matrix_101 | ERF5 | Not available | Upstream | -58 |
Matrix_119 | RRTF1 | Not available | Upstream | -59 |
Matrix_138 | RRTF1 | Not available | Upstream | -59 |
Matrix_187 | CDC5 | Not available | Upstream | -54 |
Matrix_224 | ERF1 | Not available | Upstream | -59 |
Matrix_234 | RAP2.3 | Not available | Upstream | -58 |
Matrix_25 | AP3 | Not available | Upstream | -141 |
Matrix_252 | RAP2.6 | Not available | Upstream | -58 |
Matrix_277 | RAP2.6 | Not available | Upstream | -59 |
Matrix_287 | ERF2 | Not available | Upstream | -58 |
Matrix_288 | RAP2.3 | Not available | Upstream | -59 |
Matrix_295 | ERF1 | Not available | Upstream | -58 |
Matrix_314 | WRKY65;WRKY14;WRKY35;WRKY69;WRKY16;ATWRKY52 | Not available | Upstream | -471 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -59 |
Matrix_334 | AT3G23230 | Not available | Upstream | -57 |
Matrix_343 | AT2G33710 | Not available | Upstream | -58 |
Matrix_349 | CDC5 | Not available | Upstream | -54 |
Matrix_35 | YAB5;YAB3 | Not available | Upstream | -54 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -59 |
Matrix_360 | ORA59 | Not available | Upstream | -58 |
Matrix_363 | RAP2.3 | Not available | Upstream | -59 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -58 |
Matrix_378 | ATERF1 | Not available | Upstream | -58 |
Matrix_406 | ATERF-7 | Not available | Upstream | -60 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -57 |
Matrix_449 | BIM2 | Not available | Upstream | -413 |
Matrix_473 | RRTF1 | Not available | Upstream | -58 |
Matrix_48 | PI | Not available | Upstream | -14 |
Matrix_484 | ATERF13 | Not available | Upstream | -58 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -59 |
Matrix_517 | ERF12 | Not available | Upstream | -50 |
Matrix_80 | BIM1 | Not available | Upstream | -414 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -57 |
Motif_116 | INRNTPSADB | Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box | Upstream | -347 |
| | | Upstream | -337 |
Motif_125 | BOXIINTPATPB | Box II found in the tobacco plastid atpB gene promoter; Conserved in several NCII (nonconsensus type II) promoters of plastid genes; Important for the activity of this NCII promoter | Upstream | -528 |
Motif_139 | RHERPATEXPA7 | Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patterns | Upstream | -45 |
| | | Upstream | -35 |
Motif_182 | MYB2CONSENSUSAT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22 | Upstream | -518 |
Motif_221 | MYBCORE | Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis | Upstream | -518 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -57 |
Motif_320 | AGCBOXNPGLB | AGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC box | Upstream | -57 |
Motif_336 | MYBMOUSE | Binding site for mouse c-myb protein | Upstream | -518 |
Motif_402 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | Upstream | -59 |
Motif_50 | AtERF-7;AtERF-4;AtERF-3;AtERF-1;AtERF-2;AtERF-5 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responses | Upstream | -58 |
Motif_536 | TBOXATGAPB | Tbox found in the Arabidopsis thaliana GAPB gene promoter; Located between -94 and -89 (T1) and also between -84 and -79 (T2); Mutations in the Tbox resulted in reductions of light-activated gene transcription; GAPB encodes the B subunit of chloroplast glyceraldehyde-3-phosphate dehydrogenase(GADPH) of A.T.; Promoter analysis of the nuclear gene encoding the chloroplast glyceraldehyde-3-phosphate dehydrogenase B subunit of Arabidopsis thaliana | Upstream | -500 |
Motif_85 | SORLIP5AT | one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Over-represented in both light-induced cotyledon-specific and root-specific genes; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data | Upstream | -347 |
| | | Upstream | -341 |
| | | Upstream | -337 |