View conserved binding sites


Gene
CM00022G05640
Description
protein ligase RING1-like
Alias
MELO3C014733;MELO3C014733T1
Binding siteNameDescriptionLocationPosition
Matrix_179AtMYB84;MYB36;MYB68;O49746_ARATHNot availableUpstream-116
Matrix_25AP3Not availableUpstream-272
Matrix_269FHY3/FAR1Not availableUpstream-322
Upstream-325
Matrix_362DEAR3Not availableUpstream-384
Matrix_48PINot availableUpstream-325
Upstream-493
Upstream-501
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-636
Upstream-646
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionUpstream-636
Upstream-646
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-560