Matrix_101 | ERF5 | Not available | Upstream | -755 |
| | | Upstream | -756 |
| | | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -932 |
Matrix_110 | ATABI4;AT3G57600 | Not available | Upstream | -756 |
| | | Upstream | -757 |
| | | Upstream | -869 |
Matrix_119 | RRTF1 | Not available | Upstream | -758 |
| | | Upstream | -870 |
Matrix_138 | RRTF1 | Not available | Upstream | -758 |
| | | Upstream | -870 |
Matrix_146 | ORA47 | Not available | Upstream | -759 |
| | | Upstream | -871 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -758 |
| | | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -932 |
Matrix_154 | AT1G22190;AT1G36060;AT1G64380;RAP2.4;AT2G20880;AT2G22200;AT4G13620;AT4G28140;AT4G39780;AT5G65130 | Not available | Upstream | -756 |
Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -756 |
Matrix_190 | ATERF1 | Not available | Upstream | -755 |
| | | Upstream | -756 |
| | | Upstream | -757 |
| | | Upstream | -759 |
| | | Upstream | -930 |
Matrix_224 | ERF1 | Not available | Upstream | -754 |
| | | Upstream | -755 |
| | | Upstream | -758 |
| | | Upstream | -870 |
| | | Upstream | -931 |
Matrix_234 | RAP2.3 | Not available | Upstream | -755 |
| | | Upstream | -756 |
| | | Upstream | -759 |
| | | Upstream | -760 |
| | | Upstream | -871 |
| | | Upstream | -929 |
Matrix_243 | RAP2.12;RAP2.2 | Not available | Upstream | -760 |
| | | Upstream | -872 |
| | | Upstream | -933 |
Matrix_244 | DREB2C | Not available | Upstream | -754 |
Matrix_252 | RAP2.6 | Not available | Upstream | -755 |
| | | Upstream | -756 |
| | | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -932 |
Matrix_261 | ATERF-1 | Not available | Upstream | -755 |
| | | Upstream | -756 |
| | | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -929 |
| | | Upstream | -932 |
Matrix_272 | DEAR4 | Not available | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -945 |
Matrix_287 | ERF2 | Not available | Upstream | -755 |
| | | Upstream | -756 |
| | | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -932 |
Matrix_295 | ERF1 | Not available | Upstream | -758 |
| | | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -932 |
Matrix_321 | HRD | Not available | Upstream | -755 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -754 |
| | | Upstream | -755 |
| | | Upstream | -758 |
| | | Upstream | -870 |
| | | Upstream | -928 |
| | | Upstream | -931 |
Matrix_334 | AT3G23230 | Not available | Upstream | -760 |
| | | Upstream | -872 |
| | | Upstream | -933 |
Matrix_343 | AT2G33710 | Not available | Upstream | -755 |
| | | Upstream | -756 |
| | | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -929 |
| | | Upstream | -932 |
Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -758 |
| | | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -932 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -754 |
| | | Upstream | -755 |
| | | Upstream | -758 |
| | | Upstream | -870 |
| | | Upstream | -928 |
| | | Upstream | -931 |
Matrix_360 | ORA59 | Not available | Upstream | -758 |
| | | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -932 |
Matrix_363 | RAP2.3 | Not available | Upstream | -758 |
| | | Upstream | -870 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -932 |
Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -755 |
| | | Upstream | -756 |
| | | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -932 |
Matrix_378 | ATERF1 | Not available | Upstream | -755 |
| | | Upstream | -756 |
| | | Upstream | -759 |
| | | Upstream | -871 |
Matrix_385 | DEAR4 | Not available | Upstream | -754 |
Matrix_394 | DREB_U | Not available | Upstream | -754 |
Matrix_405 | DREB2C | Not available | Upstream | -930 |
| | | Upstream | -933 |
Matrix_406 | ATERF-7 | Not available | Upstream | -756 |
| | | Upstream | -757 |
| | | Upstream | -869 |
| | | Upstream | -930 |
Matrix_409 | DEAR3 | Not available | Upstream | -754 |
| | | Upstream | -755 |
| | | Upstream | -758 |
| | | Upstream | -870 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -760 |
| | | Upstream | -872 |
| | | Upstream | -933 |
| | | Upstream | -946 |
Matrix_45 | DRN | Not available | Upstream | -755 |
| | | Upstream | -756 |
| | | Upstream | -758 |
| | | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -932 |
Matrix_454 | AT1G77200;ATERF38;AT4G16750;AT5G52020 | Not available | Upstream | -754 |
Matrix_462 | ATERF-8 | Not available | Upstream | -756 |
| | | Upstream | -757 |
| | | Upstream | -869 |
Matrix_473 | RRTF1 | Not available | Upstream | -755 |
| | | Upstream | -756 |
| | | Upstream | -759 |
| | | Upstream | -760 |
| | | Upstream | -871 |
Matrix_484 | ATERF13 | Not available | Upstream | -758 |
| | | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -932 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -755 |
| | | Upstream | -756 |
| | | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -932 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -754 |
| | | Upstream | -755 |
| | | Upstream | -758 |
| | | Upstream | -870 |
| | | Upstream | -928 |
| | | Upstream | -931 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -756 |
| | | Upstream | -757 |
| | | Upstream | -760 |
| | | Upstream | -872 |
| | | Upstream | -930 |
| | | Upstream | -933 |
Matrix_515 | ddf2;ATCBF3;CBF1;CBF4 | Not available | Upstream | -753 |
Matrix_517 | ERF12 | Not available | Upstream | -758 |
| | | Upstream | -759 |
| | | Upstream | -871 |
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -754 |
| | | Upstream | -755 |
| | | Upstream | -758 |
| | | Upstream | -870 |
| | | Upstream | -931 |
Matrix_61 | ATCBF3 | Not available | Upstream | -754 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -760 |
| | | Upstream | -872 |
| | | Upstream | -933 |
| | | Upstream | -946 |
Matrix_91 | CRF3 | Not available | Upstream | -755 |
| | | Upstream | -756 |
| | | Upstream | -759 |
| | | Upstream | -871 |
| | | Upstream | -932 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -759 |
Motif_371 | DRE-like promoter motif | The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses | Upstream | -755 |
Motif_454 | DRECRTCOREAT | Core motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower) | Upstream | -756 |
Motif_57 | ABREOSRAB21 | ABA responsive element (ABRE) of wheat Em and rice rab21 genes; Proposed consensus sequence for the repeated motif (Em1a and Em1b) of wheat Em gene | Upstream | -754 |
Motif_591 | CBFHV | Binding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs) | Upstream | -756 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Downstream | 2638 |
Motif_682 | GT1GMSCAM4 | GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expression | Downstream | 2638 |
Motif_94 | UP1ATMSD | Up1 motif found in 162 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis | Upstream | -1063 |
| | | Upstream | -1105 |