View conserved binding sites


Gene
CM00007G04410
Description
protein L4
Alias
MELO3C007416;MELO3C007416T1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-755
Upstream-756
Upstream-759
Upstream-871
Upstream-932
Matrix_110ATABI4;AT3G57600Not availableUpstream-756
Upstream-757
Upstream-869
Matrix_119RRTF1Not availableUpstream-758
Upstream-870
Matrix_138RRTF1Not availableUpstream-758
Upstream-870
Matrix_146ORA47Not availableUpstream-759
Upstream-871
Matrix_147ERF3;AT1G80580Not availableUpstream-758
Upstream-759
Upstream-871
Upstream-932
Matrix_154AT1G22190;AT1G36060;AT1G64380;RAP2.4;AT2G20880;AT2G22200;AT4G13620;AT4G28140;AT4G39780;AT5G65130Not availableUpstream-756
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-756
Matrix_190ATERF1Not availableUpstream-755
Upstream-756
Upstream-757
Upstream-759
Upstream-930
Matrix_224ERF1Not availableUpstream-754
Upstream-755
Upstream-758
Upstream-870
Upstream-931
Matrix_234RAP2.3Not availableUpstream-755
Upstream-756
Upstream-759
Upstream-760
Upstream-871
Upstream-929
Matrix_243RAP2.12;RAP2.2Not availableUpstream-760
Upstream-872
Upstream-933
Matrix_244DREB2CNot availableUpstream-754
Matrix_252RAP2.6Not availableUpstream-755
Upstream-756
Upstream-759
Upstream-871
Upstream-932
Matrix_261ATERF-1Not availableUpstream-755
Upstream-756
Upstream-759
Upstream-871
Upstream-929
Upstream-932
Matrix_272DEAR4Not availableUpstream-759
Upstream-871
Upstream-945
Matrix_287ERF2Not availableUpstream-755
Upstream-756
Upstream-759
Upstream-871
Upstream-932
Matrix_295ERF1Not availableUpstream-758
Upstream-759
Upstream-871
Upstream-932
Matrix_321HRDNot availableUpstream-755
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-754
Upstream-755
Upstream-758
Upstream-870
Upstream-928
Upstream-931
Matrix_334AT3G23230Not availableUpstream-760
Upstream-872
Upstream-933
Matrix_343AT2G33710Not availableUpstream-755
Upstream-756
Upstream-759
Upstream-871
Upstream-929
Upstream-932
Matrix_344ATERF15;AT4G18450Not availableUpstream-758
Upstream-759
Upstream-871
Upstream-932
Matrix_355ERF10;ERF11Not availableUpstream-754
Upstream-755
Upstream-758
Upstream-870
Upstream-928
Upstream-931
Matrix_360ORA59Not availableUpstream-758
Upstream-759
Upstream-871
Upstream-932
Matrix_363RAP2.3Not availableUpstream-758
Upstream-870
Matrix_374AT5G07580;AT5G61590Not availableUpstream-759
Upstream-871
Upstream-932
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-755
Upstream-756
Upstream-759
Upstream-871
Upstream-932
Matrix_378ATERF1Not availableUpstream-755
Upstream-756
Upstream-759
Upstream-871
Matrix_385DEAR4Not availableUpstream-754
Matrix_394DREB_UNot availableUpstream-754
Matrix_405DREB2CNot availableUpstream-930
Upstream-933
Matrix_406ATERF-7Not availableUpstream-756
Upstream-757
Upstream-869
Upstream-930
Matrix_409DEAR3Not availableUpstream-754
Upstream-755
Upstream-758
Upstream-870
Matrix_426CRF1;CRF2Not availableUpstream-760
Upstream-872
Upstream-933
Upstream-946
Matrix_45DRNNot availableUpstream-755
Upstream-756
Upstream-758
Upstream-759
Upstream-871
Upstream-932
Matrix_454AT1G77200;ATERF38;AT4G16750;AT5G52020Not availableUpstream-754
Matrix_462ATERF-8Not availableUpstream-756
Upstream-757
Upstream-869
Matrix_473RRTF1Not availableUpstream-755
Upstream-756
Upstream-759
Upstream-760
Upstream-871
Matrix_484ATERF13Not availableUpstream-758
Upstream-759
Upstream-871
Upstream-932
Matrix_493AT1G22985;AT1G71130Not availableUpstream-755
Upstream-756
Upstream-759
Upstream-871
Upstream-932
Matrix_50ATERF14;AT5G43410Not availableUpstream-754
Upstream-755
Upstream-758
Upstream-870
Upstream-928
Upstream-931
Matrix_506DRNL;ATERF-4Not availableUpstream-756
Upstream-757
Upstream-760
Upstream-872
Upstream-930
Upstream-933
Matrix_515ddf2;ATCBF3;CBF1;CBF4Not availableUpstream-753
Matrix_517ERF12Not availableUpstream-758
Upstream-759
Upstream-871
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-754
Upstream-755
Upstream-758
Upstream-870
Upstream-931
Matrix_61ATCBF3Not availableUpstream-754
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-760
Upstream-872
Upstream-933
Upstream-946
Matrix_91CRF3Not availableUpstream-755
Upstream-756
Upstream-759
Upstream-871
Upstream-932
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-759
Motif_371DRE-like promoter motifThe Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental StressesUpstream-755
Motif_454DRECRTCOREATCore motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower)Upstream-756
Motif_57ABREOSRAB21ABA responsive element (ABRE) of wheat Em and rice rab21 genes; Proposed consensus sequence for the repeated motif (Em1a and Em1b) of wheat Em geneUpstream-754
Motif_591CBFHVBinding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs)Upstream-756
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionDownstream2638
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionDownstream2638
Motif_94UP1ATMSDUp1 motif found in 162 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-1063
Upstream-1105