View conserved binding sites


Gene
CM00001G02470
Description
SPS1-related proline-alanine-rich protein kinase
Alias
MELO3C002150;MELO3C002150T1
Binding siteNameDescriptionLocationPosition
Matrix_108PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-108
Upstream-1825
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-106
Matrix_120BEE2Not availableUpstream-109
Matrix_14ZCW32;AT5G62610Not availableUpstream-110
Matrix_150UNE10;PIF7Not availableUpstream-109
Upstream-110
Upstream-1827
Matrix_153AP2Not availableUpstream-108
Upstream-1825
Matrix_158AT1G03040;LRL1;UNE12;LRL2;LRL3Not availableUpstream-109
Matrix_19PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signalingUpstream-109
Matrix_200PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815Not availableUpstream-109
Matrix_233MYC3Not availableUpstream-109
Upstream-110
Matrix_301PIL5Not availableUpstream-103
Matrix_320MYC4Not availableUpstream-109
Upstream-110
Matrix_323BIM3Not availableUpstream-109
Matrix_330MYC2;TT8Not availableUpstream-109
Matrix_332SPT;ALCNot availableUpstream-110
Upstream-1827
Matrix_345POC1Not availableUpstream-106
Matrix_365AT1G10120;AT1G25330;CIB5;AT1G68920;AT3G23690;CIB1Not availableUpstream-109
Upstream-110
Matrix_389ILR3Not availableUpstream-109
Matrix_406ATERF-7Not availableUpstream-1858
Matrix_449BIM2Not availableUpstream-109
Matrix_465MYC4Not availableUpstream-109
Matrix_476bHLH115;bHLH34Not availableUpstream-109
Upstream-110
Matrix_48PINot availableUpstream-10
Matrix_480BES1Not availableUpstream-109
Matrix_49FHY3/FAR1Not availableUpstream-105
Matrix_53MYC3Not availableUpstream-106
Matrix_60AT1G01260;AT5G57150Not availableUpstream-109
Upstream-110
Matrix_64PIF5Not availableUpstream-1827
Matrix_77PRR5Not availableUpstream-107
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-109
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-110
Upstream-1827
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-110
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-109
Upstream-110
Upstream-1827
Motif_321TATABOX5TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysisUpstream-89
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-110
Upstream-1827
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-110
Upstream-1827
Motif_85SORLIP5ATone of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Over-represented in both light-induced cotyledon-specific and root-specific genes; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-97