Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -108 |
| | | Upstream | -1825 |
Matrix_118 | PIF3_2 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -106 |
Matrix_120 | BEE2 | Not available | Upstream | -109 |
Matrix_14 | ZCW32;AT5G62610 | Not available | Upstream | -110 |
Matrix_150 | UNE10;PIF7 | Not available | Upstream | -109 |
| | | Upstream | -110 |
| | | Upstream | -1827 |
Matrix_153 | AP2 | Not available | Upstream | -108 |
| | | Upstream | -1825 |
Matrix_158 | AT1G03040;LRL1;UNE12;LRL2;LRL3 | Not available | Upstream | -109 |
Matrix_19 | PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling | Upstream | -109 |
Matrix_200 | PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815 | Not available | Upstream | -109 |
Matrix_233 | MYC3 | Not available | Upstream | -109 |
| | | Upstream | -110 |
Matrix_301 | PIL5 | Not available | Upstream | -103 |
Matrix_320 | MYC4 | Not available | Upstream | -109 |
| | | Upstream | -110 |
Matrix_323 | BIM3 | Not available | Upstream | -109 |
Matrix_330 | MYC2;TT8 | Not available | Upstream | -109 |
Matrix_332 | SPT;ALC | Not available | Upstream | -110 |
| | | Upstream | -1827 |
Matrix_345 | POC1 | Not available | Upstream | -106 |
Matrix_365 | AT1G10120;AT1G25330;CIB5;AT1G68920;AT3G23690;CIB1 | Not available | Upstream | -109 |
| | | Upstream | -110 |
Matrix_389 | ILR3 | Not available | Upstream | -109 |
Matrix_406 | ATERF-7 | Not available | Upstream | -1858 |
Matrix_449 | BIM2 | Not available | Upstream | -109 |
Matrix_465 | MYC4 | Not available | Upstream | -109 |
Matrix_476 | bHLH115;bHLH34 | Not available | Upstream | -109 |
| | | Upstream | -110 |
Matrix_48 | PI | Not available | Upstream | -10 |
Matrix_480 | BES1 | Not available | Upstream | -109 |
Matrix_49 | FHY3/FAR1 | Not available | Upstream | -105 |
Matrix_53 | MYC3 | Not available | Upstream | -106 |
Matrix_60 | AT1G01260;AT5G57150 | Not available | Upstream | -109 |
| | | Upstream | -110 |
Matrix_64 | PIF5 | Not available | Upstream | -1827 |
Matrix_77 | PRR5 | Not available | Upstream | -107 |
Motif_139 | RHERPATEXPA7 | Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patterns | Upstream | -109 |
Motif_179 | CACGTGMOTIF;BES1;PIF4;PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -110 |
| | | Upstream | -1827 |
Motif_194 | EBOXBNNAPA | E-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1 | Upstream | -110 |
Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -109 |
| | | Upstream | -110 |
| | | Upstream | -1827 |
Motif_321 | TATABOX5 | TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysis | Upstream | -89 |
Motif_339 | ABRE-like binding site motif | Molecular responses to dehydration and low temperature | Upstream | -110 |
| | | Upstream | -1827 |
Motif_448 | IRO2OS | OsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiency | Upstream | -110 |
| | | Upstream | -1827 |
Motif_85 | SORLIP5AT | one of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Over-represented in both light-induced cotyledon-specific and root-specific genes; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray data | Upstream | -97 |