View conserved binding sites


Gene
CM00001G01240
Description
No description available
Alias
MELO3C002035;MELO3C002035T1
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-461
Matrix_113ABI5Not availableUpstream-463
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-458
Upstream-459
Matrix_120BEE2Not availableUpstream-462
Matrix_122ABF1;AREB2Not availableUpstream-462
Matrix_129ABF1Not availableUpstream-462
Upstream-486
Matrix_134ABF1Not availableUpstream-463
Upstream-487
Matrix_145GBF4;AT5G44080Not availableUpstream-463
Upstream-487
Matrix_156POC1Not availableUpstream-461
Upstream-463
Matrix_192FHY3/FAR1Not availableUpstream-463
Matrix_194HYH;HY5Not availableUpstream-459
Matrix_200PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815Not availableUpstream-462
Matrix_214AP1Not availableUpstream-460
Upstream-484
Matrix_247PIF3Not availableUpstream-462
Matrix_264ATAREB1Not availableUpstream-459
Upstream-462
Matrix_300bZIP68;bZIP16Not availableUpstream-463
Matrix_301PIL5Not availableUpstream-463
Matrix_331GBF1Not availableUpstream-463
Matrix_332SPT;ALCNot availableUpstream-462
Upstream-463
Matrix_338AP2Not availableUpstream-459
Matrix_345POC1Not availableUpstream-458
Upstream-459
Matrix_356PRR5Not availableUpstream-455
Matrix_389ILR3Not availableUpstream-462
Matrix_396AP3Not availableUpstream-41
Matrix_403BZR1Not availableUpstream-460
Matrix_443AGL15Not availableUpstream-460
Matrix_488ABF1Not availableUpstream-454
Upstream-461
Matrix_53MYC3Not availableUpstream-464
Matrix_55PIF3Not availableUpstream-461
Matrix_64PIF5Not availableUpstream-463
Matrix_7PIF4Not availableUpstream-464
Matrix_77PRR5Not availableUpstream-460
Upstream-461
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-463
Upstream-487
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-462
Upstream-463
Upstream-486
Upstream-487
Motif_243TELOBOXATEEF1AA1telo-box (telomere motif) found in the Arabidopsis (A.t.) eEF1AA1 gene promoter; Conserved in all known plant eEF1A gene promoters; Found in the 5' region of numerous genes encoding components of the translational apparatus; Required for the activation of expression in root primordia; Acts co-operatively with tef-box; Binding site of AtPur alpha-1; Plant interstitial telomere mitifs participate in the control of gene expression in root meristemsUpstream-41
Motif_244ABRE-like binding site motifNot availableUpstream-463
Upstream-485
Upstream-487
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-463
Upstream-487
Motif_358UP2ATMSDUp2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-42
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-462
Upstream-463
Upstream-487
Motif_473ABREOSRGA1ABRE (ABA responsive element) in rice RGA1 encoding a G protein alpha subunit;ABRE; ABA and water-stress responses; Found in maize rab28; maize rab28 is ABA-inducible in embryos and vegetative tissues; Found in the Arabidopsis (A.t.) alcohol dehydrogenase (Adh) gene promoter; ABRE2; Found in the maize (Z.m.) Cat1 gene promoter; Responsible for the induction by ABA; Binding site of CBF2; Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance; The CBF genes do not appear to be autoregulated through the CRT/DRE sequence;The cis-regulatory element CCACGTGG is involved in ABA and water-stress responses of the maize gene rab28. Characterization of a maize G-box binding factor that is induced by hypoxiaUpstream-462
Motif_503EECCRCAH1EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1Upstream-493
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-464
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-492
Upstream-493