Matrix_104 | PI | Not available | Upstream | -461 |
Matrix_113 | ABI5 | Not available | Upstream | -463 |
Matrix_118 | PIF3_2 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -458 |
| | | Upstream | -459 |
Matrix_120 | BEE2 | Not available | Upstream | -462 |
Matrix_122 | ABF1;AREB2 | Not available | Upstream | -462 |
Matrix_129 | ABF1 | Not available | Upstream | -462 |
| | | Upstream | -486 |
Matrix_134 | ABF1 | Not available | Upstream | -463 |
| | | Upstream | -487 |
Matrix_145 | GBF4;AT5G44080 | Not available | Upstream | -463 |
| | | Upstream | -487 |
Matrix_156 | POC1 | Not available | Upstream | -461 |
| | | Upstream | -463 |
Matrix_192 | FHY3/FAR1 | Not available | Upstream | -463 |
Matrix_194 | HYH;HY5 | Not available | Upstream | -459 |
Matrix_200 | PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815 | Not available | Upstream | -462 |
Matrix_214 | AP1 | Not available | Upstream | -460 |
| | | Upstream | -484 |
Matrix_247 | PIF3 | Not available | Upstream | -462 |
Matrix_264 | ATAREB1 | Not available | Upstream | -459 |
| | | Upstream | -462 |
Matrix_300 | bZIP68;bZIP16 | Not available | Upstream | -463 |
Matrix_301 | PIL5 | Not available | Upstream | -463 |
Matrix_331 | GBF1 | Not available | Upstream | -463 |
Matrix_332 | SPT;ALC | Not available | Upstream | -462 |
| | | Upstream | -463 |
Matrix_338 | AP2 | Not available | Upstream | -459 |
Matrix_345 | POC1 | Not available | Upstream | -458 |
| | | Upstream | -459 |
Matrix_356 | PRR5 | Not available | Upstream | -455 |
Matrix_389 | ILR3 | Not available | Upstream | -462 |
Matrix_396 | AP3 | Not available | Upstream | -41 |
Matrix_403 | BZR1 | Not available | Upstream | -460 |
Matrix_443 | AGL15 | Not available | Upstream | -460 |
Matrix_488 | ABF1 | Not available | Upstream | -454 |
| | | Upstream | -461 |
Matrix_53 | MYC3 | Not available | Upstream | -464 |
Matrix_55 | PIF3 | Not available | Upstream | -461 |
Matrix_64 | PIF5 | Not available | Upstream | -463 |
Matrix_7 | PIF4 | Not available | Upstream | -464 |
Matrix_77 | PRR5 | Not available | Upstream | -460 |
| | | Upstream | -461 |
Motif_179 | CACGTGMOTIF;BES1;PIF4;PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -463 |
| | | Upstream | -487 |
Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -462 |
| | | Upstream | -463 |
| | | Upstream | -486 |
| | | Upstream | -487 |
Motif_243 | TELOBOXATEEF1AA1 | telo-box (telomere motif) found in the Arabidopsis (A.t.) eEF1AA1 gene promoter; Conserved in all known plant eEF1A gene promoters; Found in the 5' region of numerous genes encoding components of the translational apparatus; Required for the activation of expression in root primordia; Acts co-operatively with tef-box; Binding site of AtPur alpha-1; Plant interstitial telomere mitifs participate in the control of gene expression in root meristems | Upstream | -41 |
Motif_244 | ABRE-like binding site motif | Not available | Upstream | -463 |
| | | Upstream | -485 |
| | | Upstream | -487 |
Motif_339 | ABRE-like binding site motif | Molecular responses to dehydration and low temperature | Upstream | -463 |
| | | Upstream | -487 |
Motif_358 | UP2ATMSD | Up2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis | Upstream | -42 |
Motif_448 | IRO2OS | OsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiency | Upstream | -462 |
| | | Upstream | -463 |
| | | Upstream | -487 |
Motif_473 | ABREOSRGA1 | ABRE (ABA responsive element) in rice RGA1 encoding a G protein alpha subunit;ABRE; ABA and water-stress responses; Found in maize rab28; maize rab28 is ABA-inducible in embryos and vegetative tissues; Found in the Arabidopsis (A.t.) alcohol dehydrogenase (Adh) gene promoter; ABRE2; Found in the maize (Z.m.) Cat1 gene promoter; Responsible for the induction by ABA; Binding site of CBF2; Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance; The CBF genes do not appear to be autoregulated through the CRT/DRE sequence;The cis-regulatory element CCACGTGG is involved in ABA and water-stress responses of the maize gene rab28. Characterization of a maize G-box binding factor that is induced by hypoxia | Upstream | -462 |
Motif_503 | EECCRCAH1 | EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1 | Upstream | -493 |
Motif_627 | ACGTABREMOTIFA2OSEM | Experimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis | Upstream | -464 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -492 |
| | | Upstream | -493 |