View conserved binding sites


Gene
BR09G18860
Description
Cyclin-L1-1
Alias
Bra032800;Bra032800
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-36
Matrix_110ATABI4;AT3G57600Not availableUpstream-34
Matrix_146ORA47Not availableUpstream-36
Upstream-37
Matrix_147ERF3;AT1G80580Not availableUpstream-36
Matrix_190ATERF1Not availableUpstream-34
Matrix_224ERF1Not availableUpstream-32
Upstream-33
Upstream-35
Upstream-36
Matrix_234RAP2.3Not availableUpstream-33
Upstream-34
Matrix_252RAP2.6Not availableUpstream-33
Upstream-34
Upstream-36
Upstream-37
Matrix_261ATERF-1Not availableUpstream-36
Matrix_287ERF2Not availableUpstream-36
Upstream-37
Matrix_295ERF1Not availableUpstream-36
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-35
Upstream-36
Matrix_334AT3G23230Not availableUpstream-37
Upstream-38
Matrix_343AT2G33710Not availableUpstream-33
Upstream-34
Upstream-36
Upstream-37
Matrix_344ATERF15;AT4G18450Not availableUpstream-36
Matrix_355ERF10;ERF11Not availableUpstream-35
Upstream-36
Matrix_360ORA59Not availableUpstream-36
Upstream-37
Matrix_374AT5G07580;AT5G61590Not availableUpstream-36
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-36
Upstream-37
Matrix_378ATERF1Not availableUpstream-36
Matrix_406ATERF-7Not availableUpstream-34
Matrix_409DEAR3Not availableUpstream-35
Upstream-36
Matrix_426CRF1;CRF2Not availableUpstream-34
Upstream-35
Upstream-37
Upstream-38
Matrix_45DRNNot availableUpstream-36
Matrix_454AT1G77200;ATERF38;AT4G16750;AT5G52020Not availableUpstream-35
Matrix_462ATERF-8Not availableUpstream-34
Matrix_473RRTF1Not availableUpstream-33
Upstream-34
Matrix_484ATERF13Not availableUpstream-36
Matrix_493AT1G22985;AT1G71130Not availableUpstream-33
Upstream-34
Upstream-36
Upstream-37
Matrix_50ATERF14;AT5G43410Not availableUpstream-35
Matrix_506DRNL;ATERF-4Not availableUpstream-37
Upstream-38
Matrix_517ERF12Not availableUpstream-36
Upstream-37
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-32
Upstream-33
Upstream-35
Upstream-36
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-37
Upstream-38
Matrix_91CRF3Not availableUpstream-33
Upstream-34
Upstream-36
Upstream-37
Motif_286SEBFCONSSTPR10ABinding site of the potato silencing element binding factor (SEBF) gene found in promoter of pathogenesis-related gene (PR-10a); Located between -45 and -39; Similar to the auxin response elementUpstream-29
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-37
Motif_365ARF1 binding site motifARF (auxin response factor) binding site found in the promoters of primary/early auxin response genes of Arabidopsis thaliana; AuxRE;Binding site of Arabidopsis ARF1 (Auxin response factor1); Sequence found in NDE element in Soybean SAUR (Small Auxin-Up RNA) 15A gene promoter;Found in D1 or D4 element in Soybean GH3 promoter; This element was enriched in the 5'-flanking region of genes up-regulated by both IAA and BL;Dimerization and DNA binding of auxin response factorsUpstream-29