| Matrix_105 | SPL14 | Not available | Upstream | -323 |
| Matrix_113 | ABI5 | Not available | Upstream | -315 |
| Matrix_122 | ABF1;AREB2 | Not available | Upstream | -315 |
| Matrix_129 | ABF1 | Not available | Upstream | -314 |
| Matrix_143 | GATA14;GATA6;GATA5 | Not available | Upstream | -1343 |
| Matrix_145 | GBF4;AT5G44080 | Not available | Upstream | -313 |
| Matrix_156 | POC1 | Not available | Upstream | -313 |
| Matrix_17 | WRKY22 | Not available | Upstream | -1909 |
| Matrix_189 | WRI1 | An AP2-type transcription factor, WRINKLED1, of Arabidopsis thaliana binds to the AW-box sequence conserved among proximal upstream regions of genes involved in fatty acid synthesis | Upstream | -710 |
| Matrix_24 | POC1 | Not available | Upstream | -318 |
| Matrix_251 | PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling | Upstream | -315 |
| Matrix_263 | WRKY33;WRKY19;WRKY32 | Not available | Upstream | -1909 |
| Matrix_264 | ATAREB1 | Not available | Upstream | -317 |
| Matrix_3 | WRKY48 | Not available | Upstream | -1909 |
| Matrix_305 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -1266 |
| Matrix_342 | SPL14 | Identification of a Consensus DNA-Binding Site for the Arabidopsis thaliana SBP Domain Transcription Factor, AtSPL14, and Binding Kinetics by Surface Plasmon Resonance | Upstream | -323 |
| Matrix_345 | POC1 | Not available | Upstream | -318 |
| Matrix_403 | BZR1 | Not available | Upstream | -316 |
| Matrix_415 | WRKY27 | Not available | Upstream | -310 |
| Matrix_434 | ARR11 | Not available | Upstream | -1768 |
| Matrix_55 | PIF3 | Not available | Upstream | -315 |
| Matrix_75 | WRKY29 | Not available | Upstream | -1909 |
| Motif_179 | CACGTGMOTIF;BES1;PIF4;PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -312 |
| Motif_448 | IRO2OS | OsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiency | Upstream | -312 |
| Motif_511 | RYREPEATGMGY2 | RY repeat motif (CATGCAT); Present in the 5' region of the soybean glycinin gene (Gy2) | Upstream | -383 |
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