PLAZA 3.0 Dicots DNA motifs

View conserved binding sites

Gene: BR07G16050
Description: Callose synthase
Alias: Bra003364;Bra003364

Binding site	Name	Description	Location	Position
Matrix_208	AP1	Not available	Intron	2990
Matrix_269	FHY3/FAR1	Not available	Intron	5322
Matrix_358	AGL15	Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study	Intron	3637
Matrix_364	FLC	Not available	Intron	10243
			Intron	11309
Matrix_412	GL1	Not available	Intron	3066
			Intron	3195
			Intron	5331
			Intron	11538
Matrix_74	LFY	Not available	Intron	8286
			Intron	9400
			Intron	9683
Motif_129	GAGAGMGSA1	GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNA	Upstream	-79
Motif_441	GAGA8HVBKN3	GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBR	Upstream	-79
			Upstream	-77
Motif_536	TBOXATGAPB	Tbox found in the Arabidopsis thaliana GAPB gene promoter; Located between -94 and -89 (T1) and also between -84 and -79 (T2); Mutations in the Tbox resulted in reductions of light-activated gene transcription; GAPB encodes the B subunit of chloroplast glyceraldehyde-3-phosphate dehydrogenase(GADPH) of A.T.; Promoter analysis of the nuclear gene encoding the chloroplast glyceraldehyde-3-phosphate dehydrogenase B subunit of Arabidopsis thaliana	Upstream	-737
Motif_69	CTRMCAMV35S	CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA	Upstream	-79
			Upstream	-77
			Upstream	-75
			Upstream	-73
			Upstream	-71
			Upstream	-69
Motif_86	ACGTABOX	A-box according to the nomenclature of ACGT elements; One of ACGT elements; Found in ocs gene; RITA-1 binding site; G motif; G motif and TATCCAY motif (a GATA motif as its antisense sequence) are responsible for sugar repression	Intron	2918