View conserved binding sites


Gene
BR06G14110
Description
Phosphatidylinositol/phosphatidylcholine transfer protein
Alias
Bra025754;Bra025754
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-334
Matrix_113ABI5Not availableUpstream-334
Matrix_122ABF1;AREB2Not availableUpstream-334
Matrix_129ABF1Not availableUpstream-335
Matrix_134ABF1Not availableUpstream-335
Matrix_184AGL15Not availableUpstream-381
Matrix_192FHY3/FAR1Not availableUpstream-332
Matrix_224ERF1Not availableUpstream-173
Matrix_243RAP2.12;RAP2.2Not availableUpstream-173
Matrix_264ATAREB1Not availableUpstream-332
Upstream-335
Matrix_287ERF2Not availableUpstream-172
Matrix_338AP2Not availableUpstream-332
Matrix_344ATERF15;AT4G18450Not availableUpstream-174
Matrix_356PRR5Not availableUpstream-332
Matrix_360ORA59Not availableUpstream-174
Matrix_374AT5G07580;AT5G61590Not availableUpstream-173
Matrix_403BZR1Not availableUpstream-333
Matrix_406ATERF-7Not availableUpstream-174
Matrix_443AGL15Not availableUpstream-333
Matrix_45DRNNot availableUpstream-174
Matrix_5AT5G51190;ERF104Not availableUpstream-174
Matrix_50ATERF14;AT5G43410Not availableUpstream-173
Matrix_502AT3G13040Not availableUpstream-918
Matrix_74LFYNot availableUpstream-382
Motif_136SEF4MOTIFGM7SSEF4 binding site; Soybean consensus sequence found in 5'upstream region (-199) of beta-conglycinin (7S globulin) gene (Gmg17.1); Binding with SEF4 (soybean embryo factor 4)Upstream-384
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-336
Motif_410ANAERO1CONSENSUSOne of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO1CONSENSUS by the PLACEdb curatorUpstream-387
Motif_522E2FaThe E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plantsUpstream-350
Motif_591CBFHVBinding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs)Upstream-26
Motif_609AP2The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence elementUpstream-387
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-334
Motif_672AP2The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence elementUpstream-387
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-65