View conserved binding sites


Gene
BR03G41600
Description
Cyclin-dependent kinase inhibitor 2
Alias
Bra012894;Bra012894
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-275
Matrix_110ATABI4;AT3G57600Not availableUpstream-276
Matrix_138RRTF1Not availableUpstream-274
Matrix_146ORA47Not availableUpstream-275
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-274
Matrix_179AtMYB84;MYB36;MYB68;O49746_ARATHNot availableUpstream-229
Matrix_190ATERF1Not availableUpstream-276
Upstream-275
Matrix_234RAP2.3Not availableUpstream-276
Upstream-275
Matrix_252RAP2.6Not availableUpstream-276
Upstream-275
Matrix_261ATERF-1Not availableUpstream-274
Matrix_272DEAR4Not availableUpstream-275
Matrix_288RAP2.3Not availableUpstream-274
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-274
Matrix_343AT2G33710Not availableUpstream-275
Matrix_355ERF10;ERF11Not availableUpstream-274
Matrix_378ATERF1Not availableUpstream-275
Matrix_401MYB55Not availableUpstream-226
Matrix_45DRNNot availableUpstream-276
Upstream-273
Matrix_462ATERF-8Not availableUpstream-273
Matrix_473RRTF1Not availableUpstream-275
Matrix_493AT1G22985;AT1G71130Not availableUpstream-274
Matrix_50ATERF14;AT5G43410Not availableUpstream-274
Matrix_517ERF12Not availableUpstream-276
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-274
Matrix_91CRF3Not availableUpstream-274
Motif_182MYB2CONSENSUSATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22Upstream-279
Upstream-259
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisUpstream-279
Upstream-259
Motif_336MYBMOUSEBinding site for mouse c-myb proteinUpstream-279
Upstream-259
Motif_503EECCRCAH1EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1Upstream-265
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-264
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-65