Matrix_109 | GBF3 | Not available | Upstream | -1459 |
Matrix_143 | GATA14;GATA6;GATA5 | Not available | Upstream | -1640 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -703 |
| | | Upstream | -704 |
Matrix_151 | ASIL1 | Not available | Upstream | -702 |
| | | Upstream | -703 |
Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -702 |
| | | Upstream | -703 |
| | | Upstream | -704 |
| | | Upstream | -705 |
Matrix_179 | AtMYB84;MYB36;MYB68;O49746_ARATH | Not available | Upstream | -1088 |
Matrix_208 | AP1 | Not available | Upstream | -804 |
Matrix_215 | ARF1 | ARF1, a transcription factor that binds to auxin response elements | Upstream | -725 |
Matrix_224 | ERF1 | Not available | Upstream | -684 |
Matrix_305 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -914 |
| | | Upstream | -915 |
Matrix_315 | MYB111 | Not available | Upstream | -1091 |
| | | Upstream | -1137 |
Matrix_331 | GBF1 | Not available | Upstream | -1459 |
Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -703 |
| | | Upstream | -704 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -702 |
| | | Upstream | -703 |
| | | Upstream | -704 |
Matrix_408 | GATA12 | Not available | Upstream | -559 |
Matrix_438 | AtbZIP63 | Not available | Upstream | -1460 |
Matrix_448 | ATERF6 | Not available | Upstream | -702 |
| | | Upstream | -703 |
Matrix_45 | DRN | Not available | Upstream | -703 |
| | | Upstream | -704 |
Matrix_456 | bZIP60 | Not available | Upstream | -1460 |
Matrix_484 | ATERF13 | Not available | Upstream | -703 |
Matrix_496 | ATMYB15 | Not available | Upstream | -1088 |
Matrix_5 | AT5G51190;ERF104 | Not available | Upstream | -703 |
| | | Upstream | -704 |
Matrix_517 | ERF12 | Not available | Upstream | -931 |
| | | Upstream | -932 |
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -681 |
| | | Upstream | -684 |
Motif_116 | INRNTPSADB | Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box | Upstream | -775 |
Motif_16 | -300ELEMENT | Present upstream of the promoter from the B-hordein gene of barley and the alpha-gliadin, gamma-gliadin, and low molecular weight glutenin genes of wheat; See S000001 -300CORE; See S000002 -300MOTIF | Upstream | -985 |
Motif_181 | IBOXCORENT | I-box core motif in the CAMs (conserved DNA modular arrays) associated with light-responsive promoter regions | Upstream | -45 |
Motif_194 | EBOXBNNAPA | E-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1 | Upstream | -740 |
Motif_202 | OPAQUE2ZM22Z | Opaque-2 (O2) target sequence in maize 22- and 27-kD zein promoters; ACGT motif; Related to seed expression; O2 target sequence; Gene: maize 22-kD zein; transacting factor: 02 | Upstream | -916 |
Motif_216 | PYRIMIDINEBOXHVEPB1 | Pyrimidine box found in the barley EPB-1 (cysteine proteinase) gene promoter; Located between -120 to -113; Required for GA induction | Upstream | -758 |
Motif_221 | MYBCORE | Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis | Upstream | -784 |
| | | Upstream | -892 |
Motif_244 | ABRE-like binding site motif | Not available | Upstream | -918 |
Motif_321 | TATABOX5 | TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysis | Upstream | -787 |
Motif_339 | ABRE-like binding site motif | Molecular responses to dehydration and low temperature | Upstream | -918 |
Motif_383 | UPRE-III(bZIP60) | The plant-specific transcription factor NAC103 is induced by bZIP60 through a new cis-regulatory element to modulate the unfolded protein response in Arabidopsis | Upstream | -33 |
Motif_450 | E2FCONSENSUS | E2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plants | Upstream | -1273 |
Motif_563 | PYRIMIDINEBOXOSRAMY1A | Pyrimidine box found in rice alpha-amylase (RAmy1A) gene; Gibberellin-respons cis-element of GARE and pyrimidine box are partially involved in sugar repression; Found in the promoter of barley alpha-amylase (Amy2/32b) gene which is induced in the aleurone layers in response to GA; BPBF protein binds specifically to this site | Upstream | -752 |
Motif_57 | ABREOSRAB21 | ABA responsive element (ABRE) of wheat Em and rice rab21 genes; Proposed consensus sequence for the repeated motif (Em1a and Em1b) of wheat Em gene | Upstream | -932 |
Motif_584 | UPRE-III(bZIP60) | The plant-specific transcription factor NAC103 is induced by bZIP60 through a new cis-regulatory element to modulate the unfolded protein response in Arabidopsis | Upstream | -33 |
Motif_645 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -740 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -749 |
| | | Upstream | -750 |
| | | Upstream | -758 |
| | | Upstream | -759 |
| | | Upstream | -887 |
Motif_666 | MYB binding site promoter | A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes | Upstream | -1091 |
| | | Upstream | -1137 |
Motif_682 | GT1GMSCAM4 | GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expression | Upstream | -750 |
| | | Upstream | -759 |