| Matrix_369 | AT2G18300 | Not available | Upstream | -193 |
| Matrix_383 | CCA1 | Not available | Upstream | -384 |
| Matrix_476 | bHLH115;bHLH34 | Not available | Upstream | -194 |
| Matrix_77 | PRR5 | Not available | Upstream | -192 |
| Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -193 |
| | | Upstream | -194 |
| | | Upstream | -252 |
| | | Upstream | -253 |
| | | Upstream | -499 |
| Motif_318 | CGCGBOXAT | CGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRs | Upstream | -253 |
| | | Upstream | -500 |
| Motif_408 | EVENINGAT | Evening element found 46 times in the promoters of 31 cycling genes in Arabidopsis thaliana; Required for circadian control of gene expression; EE (evening element) motif; Also found in the promoter of the Solanum melongena gene encoding cysteine protease, and identified as cis-element for its circadian regulation;Orchestrated transcription of key pathways in Arabidopsis by the circadian clock | Upstream | -384 |
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