Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -258 |
Matrix_208 | AP1 | Not available | Intron | 1018 |
Matrix_222 | AGL2 | DNA binding properties of two Arabidopsis MADS domain proteins: binding consensus and dimer formation | Intron | 2079 |
Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -125 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -125 |
Matrix_414 | AGL15 | Not available | Upstream | -165 |
Matrix_448 | ATERF6 | Not available | Upstream | -126 |
Matrix_46 | AT4G21895 | Not available | Intron | 5463 |
Matrix_48 | PI | Not available | Upstream | -140 |
Matrix_5 | AT5G51190;ERF104 | Not available | Upstream | -125 |
Matrix_72 | CDF2 | Not available | Intron | 2771 |
| | | Intron | 11931 |
Matrix_77 | PRR5 | Not available | Upstream | -1737 |
Motif_143 | VND6 | Arabidopsis VASCULAR-RELATED NAC-DOMAIN6 directly regulates the genes that govern programmed cell death and secondary wall formation during xylem differentiation | Intron | 1726 |
Motif_34 | LECPLEACS2 | Core element in LeCp (tomato Cys protease) binding cis-element (from -715 to -675) in LeAcs2 gene | Upstream | -569 |
Motif_346 | SND1;VND6;VND7;NST1;NST2 | Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis | Upstream | -216 |
Motif_349 | QARBNEXTA | QAR (quantitative activator region) in promoter region of Brassica napus extA extensin gene | Intron | 2069 |
| | | Intron | 3302 |
| | | Intron | 7908 |
Motif_391 | REALPHALGLHCB21 | REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulation | Upstream | -207 |
Motif_618 | MYB1AT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis | Upstream | -208 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -84 |
Motif_682 | GT1GMSCAM4 | GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expression | Upstream | -84 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -190 |
| | | Upstream | -188 |
| | | Upstream | -134 |