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BLAST
WorkbenchView conserved binding sites
- Gene
- BR01G36400
- Description
- CTP synthase
- Alias
- Bra038742;Bra038742
| Binding site | Name | Description | Location | Position |
|---|---|---|---|---|
| Matrix_101 | ERF5 | Not available | Upstream | -135 |
| Matrix_119 | RRTF1 | Not available | Upstream | -134 |
| Matrix_138 | RRTF1 | Not available | Upstream | -134 |
| Matrix_146 | ORA47 | Not available | Upstream | -135 |
| Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -133 |
| Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -134 |
| Matrix_171 | LBD3;LBD4 | Not available | Upstream | -776 |
| Matrix_234 | RAP2.3 | Not available | Upstream | -135 |
| Matrix_272 | DEAR4 | Not available | Upstream | -135 |
| Matrix_287 | ERF2 | Not available | Upstream | -135 |
| Matrix_288 | RAP2.3 | Not available | Upstream | -134 |
| Matrix_321 | HRD | Not available | Upstream | -726 |
| Matrix_334 | AT3G23230 | Not available | Upstream | -134 |
| Matrix_363 | RAP2.3 | Not available | Upstream | -134 |
| Matrix_378 | ATERF1 | Not available | Upstream | -135 |
| Matrix_407 | AP1 | Not available | Upstream | -559 |
| Matrix_426 | CRF1;CRF2 | Not available | Upstream | -134 |
| Matrix_473 | RRTF1 | Not available | Upstream | -135 |
| Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -134 |
| Matrix_510 | AtMYB84 | More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana | Upstream | -332 |
| Matrix_517 | ERF12 | Not available | Upstream | -133 |
| Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -134 |
| Motif_320 | AGCBOXNPGLB | AGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC box | Upstream | -136 |
| Motif_365 | ARF1 binding site motif | ARF (auxin response factor) binding site found in the promoters of primary/early auxin response genes of Arabidopsis thaliana; AuxRE;Binding site of Arabidopsis ARF1 (Auxin response factor1); Sequence found in NDE element in Soybean SAUR (Small Auxin-Up RNA) 15A gene promoter;Found in D1 or D4 element in Soybean GH3 promoter; This element was enriched in the 5'-flanking region of genes up-regulated by both IAA and BL;Dimerization and DNA binding of auxin response factors | Upstream | -970 |