View conserved binding sites


Gene
BR01G00550
Description
Pentatricopeptide repeat-containing protein At4g39620, chloroplastic
Alias
Bra011847;Bra011847
Binding siteNameDescriptionLocationPosition
Matrix_206CUC1;ANAC100Not availableUpstream-163
Matrix_23ANAC46Not availableUpstream-162
Matrix_41anac058Not availableUpstream-163
Matrix_44CUC3;anac046;NAC3;ANAC087;ATNAC6;CUC2Not availableUpstream-162
Matrix_469NAC041;NAC083Not availableUpstream-163
Matrix_488ABF1Not availableUpstream-206
Matrix_49FHY3/FAR1Not availableUpstream-191
Matrix_516ANAC038;ANAC079Not availableUpstream-161
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-148
Motif_261S1FBOXSORPS1L21S1F box conserved both in spinach RPS1 and RPL21 genes encoding the plastid ribosomal protein S1 and L21, respectively; Negative element; Might play a role in downregulating RPS1 and RPL21 promoter activityUpstream-192
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-186
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-147
Motif_630WBOXNTCHN48W box identified in the region between -125 and -69 of a tobacco class I basic chitinase gene CHN48; NtWRKY1, NtWRKY2 and NtWRKY4 bound to W box; NtWRKYs possibly involved in elicitor-respsonsive transcription of defense genes in tobaccoUpstream-180
Motif_70CANBNNAPACore of (CA)n element in storage protein genes in Brasica napus; embryo- and endosperm-specific transcription of napin (storage protein) gene, napA; seed specificity; activator and repressorUpstream-157