Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -325 |
Matrix_109 | GBF3 | Not available | Upstream | -478 |
Matrix_113 | ABI5 | Not available | Upstream | -478 |
Matrix_120 | BEE2 | Not available | Upstream | -326 |
| | | Upstream | -479 |
Matrix_122 | ABF1;AREB2 | Not available | Upstream | -479 |
Matrix_14 | ZCW32;AT5G62610 | Not available | Upstream | -327 |
Matrix_15 | PIF3_1 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -475 |
| | | Upstream | -556 |
Matrix_153 | AP2 | Not available | Upstream | -325 |
Matrix_156 | POC1 | Not available | Upstream | -478 |
Matrix_158 | AT1G03040;LRL1;UNE12;LRL2;LRL3 | Not available | Upstream | -326 |
| | | Upstream | -560 |
Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Intron | 156 |
| | | Intron | 139 |
Matrix_186 | FHY3 | Not available | Intron | 156 |
| | | Intron | 140 |
Matrix_200 | PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815 | Not available | Upstream | -326 |
Matrix_217 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -323 |
| | | Upstream | -476 |
Matrix_24 | POC1 | Not available | Upstream | -475 |
Matrix_264 | ATAREB1 | Not available | Upstream | -323 |
| | | Upstream | -476 |
Matrix_300 | bZIP68;bZIP16 | Not available | Upstream | -479 |
Matrix_301 | PIL5 | Not available | Upstream | -321 |
Matrix_323 | BIM3 | Not available | Upstream | -326 |
Matrix_330 | MYC2;TT8 | Not available | Upstream | -326 |
| | | Upstream | -479 |
| | | Upstream | -560 |
Matrix_331 | GBF1 | Not available | Upstream | -478 |
Matrix_332 | SPT;ALC | Not available | Upstream | -479 |
Matrix_338 | AP2 | Not available | Upstream | -476 |
Matrix_339 | bHLH104 | Not available | Upstream | -326 |
Matrix_356 | PRR5 | Not available | Upstream | -319 |
| | | Upstream | -476 |
Matrix_365 | AT1G10120;AT1G25330;CIB5;AT1G68920;AT3G23690;CIB1 | Not available | Upstream | -327 |
Matrix_369 | AT2G18300 | Not available | Upstream | -324 |
Matrix_389 | ILR3 | Not available | Upstream | -326 |
| | | Upstream | -479 |
Matrix_403 | BZR1 | Not available | Upstream | -324 |
| | | Upstream | -477 |
Matrix_449 | BIM2 | Not available | Upstream | -326 |
Matrix_476 | bHLH115;bHLH34 | Not available | Upstream | -561 |
Matrix_480 | BES1 | Not available | Upstream | -478 |
| | | Upstream | -559 |
| | | Upstream | -615 |
Matrix_49 | FHY3/FAR1 | Not available | Intron | 159 |
| | | Intron | 142 |
Matrix_53 | MYC3 | Not available | Upstream | -324 |
| | | Upstream | -562 |
Matrix_55 | PIF3 | Not available | Upstream | -478 |
Matrix_7 | PIF4 | Not available | Upstream | -326 |
| | | Upstream | -479 |
Matrix_77 | PRR5 | Not available | Upstream | -324 |
Matrix_80 | BIM1 | Not available | Upstream | -325 |
| | | Upstream | -327 |
| | | Upstream | -561 |
Motif_179 | CACGTGMOTIF;BES1;PIF4;PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -327 |
| | | Upstream | -480 |
| | | Upstream | -561 |
| | | Upstream | -616 |
Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -326 |
| | | Upstream | -479 |
| | | Upstream | -480 |
| | | Upstream | -560 |
| | | Upstream | -561 |
| | | Upstream | -615 |
| | | Upstream | -1518 |
Motif_244 | ABRE-like binding site motif | Not available | Upstream | -478 |
| | | Upstream | -559 |
Motif_291 | ABFs binding site motif | Binding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response element | Upstream | -478 |
Motif_318 | CGCGBOXAT | CGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRs | Upstream | -84 |
Motif_448 | IRO2OS | OsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiency | Upstream | -479 |
Motif_48 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -316 |
| | | Upstream | -482 |
| | | Upstream | -563 |
| | | Upstream | -614 |
Motif_552 | MRE1 | MRE (metal responsive element); Consensus sequence of MRE; MRE; MEP-1; MBF-1; MTF-1 | Upstream | -317 |
Motif_627 | ACGTABREMOTIFA2OSEM | Experimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis | Upstream | -478 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -274 |
| | | Upstream | -276 |
| | | Upstream | -278 |
| | | Upstream | -280 |