View conserved binding sites


Gene
AT5G47650
Description
nudix hydrolase homolog 2
Alias
Q94B74;ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 2
Binding siteNameDescriptionLocationPosition
Matrix_147ERF3;AT1G80580Not availableUpstream-889
Matrix_154AT1G22190;AT1G36060;AT1G64380;RAP2.4;AT2G20880;AT2G22200;AT4G13620;AT4G28140;AT4G39780;AT5G65130Not availableUpstream-889
Matrix_187CDC5Not availableUpstream-645
Matrix_261ATERF-1Not availableUpstream-889
Matrix_295ERF1Not availableUpstream-889
Upstream-890
Matrix_344ATERF15;AT4G18450Not availableUpstream-889
Matrix_349CDC5Not availableUpstream-645
Matrix_360ORA59Not availableUpstream-889
Matrix_387ORA47Not availableUpstream-889
Matrix_395AT1G19210;ORA47;AT4G31060;AT5G21960Not availableUpstream-889
Matrix_406ATERF-7Not availableUpstream-889
Upstream-890
Matrix_426CRF1;CRF2Not availableUpstream-889
Matrix_45DRNNot availableUpstream-889
Upstream-890
Matrix_462ATERF-8Not availableUpstream-889
Upstream-890
Matrix_484ATERF13Not availableUpstream-889
Upstream-890
Matrix_50ATERF14;AT5G43410Not availableUpstream-889
Matrix_517ERF12Not availableUpstream-889
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-889
Matrix_91CRF3Not availableUpstream-889
Motif_305SP1SV40SP-1 binding site (GC box) in enhancer regions of SV40 and human metallothionein IIA (hMT IIA)Upstream-891
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-890
Motif_321TATABOX5TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysisUpstream-900
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-494
Motif_342POLASIG1PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in ArabidopsisUpstream-899
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-898
Upstream-900