View conserved binding sites


Gene
AT5G41520
Description
RNA binding Plectin/S10 domain-containing protein
Alias
Q9FFS8;ribosomal protein S10e B
Binding siteNameDescriptionLocationPosition
Matrix_184AGL15Not availableIntron1096
Matrix_224ERF1Not availableUpstream-104
Matrix_360ORA59Not availableUpstream-105
Matrix_396AP3Not availableUpstream-85
Matrix_406ATERF-7Not availableUpstream-105
Matrix_50ATERF14;AT5G43410Not availableUpstream-104
Motif_193GLK1GLK transcription factors coordinate expression of the photosynthetic apparatus in ArabidopsisUpstream-194
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-105
Motif_358UP2ATMSDUp2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-85
Motif_94UP1ATMSDUp1 motif found in 162 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-153