View conserved binding sites


Gene
AT5G24470
Description
pseudo-response regulator 5
Alias
Q6LA42;PRR5
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-1022
Matrix_111ABF3Not availableUpstream-1024
Matrix_113ABI5Not availableUpstream-1022
Matrix_134ABF1Not availableUpstream-1023
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-1377
Matrix_192FHY3/FAR1Not availableUpstream-1020
Matrix_208AP1Not availableUpstream-19
Matrix_214AP1Not availableUpstream-1021
Matrix_261ATERF-1Not availableUpstream-1376
Matrix_264ATAREB1Not availableUpstream-1020
Upstream-1023
Matrix_300bZIP68;bZIP16Not availableUpstream-1317
Matrix_356PRR5Not availableUpstream-1020
Matrix_374AT5G07580;AT5G61590Not availableUpstream-1375
Matrix_403BZR1Not availableUpstream-1021
Matrix_443AGL15Not availableUpstream-1021
Matrix_462ATERF-8Not availableUpstream-1374
Matrix_89SOC1Genome-wide identification of SOC1 and SVP targets during the floral transition in ArabidopsisUpstream-381
Upstream-943
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-1024
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-1023
Upstream-1024
Motif_244ABRE-like binding site motifNot availableUpstream-1022
Upstream-1024
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-1024
Motif_34LECPLEACS2Core element in LeCp (tomato Cys protease) binding cis-element (from -715 to -675) in LeAcs2 geneUpstream-708
Motif_408EVENINGATEvening element found 46 times in the promoters of 31 cycling genes in Arabidopsis thaliana; Required for circadian control of gene expression; EE (evening element) motif; Also found in the promoter of the Solanum melongena gene encoding cysteine protease, and identified as cis-element for its circadian regulation;Orchestrated transcription of key pathways in Arabidopsis by the circadian clockUpstream-381
Upstream-944
Motif_459SORLIP1Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-75
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-1022
Motif_72GADOWNATSequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABREUpstream-1022