| Matrix_119 | RRTF1 | Not available | Upstream | -94 |
| Matrix_130 | TCP16 | Not available | Upstream | -100 |
| Matrix_138 | RRTF1 | Not available | Upstream | -94 |
| Matrix_195 | GATA2;GATA4 | Not available | Upstream | -100 |
| Matrix_216 | TCP16 | Not available | Upstream | -100 |
| Matrix_230 | ARR11 | Not available | Upstream | -100 |
| Matrix_244 | DREB2C | Not available | Upstream | -94 |
| Matrix_266 | TCP16 | Determinants of the DNA binding specificity of class I and class II TCP transcription factors | Upstream | -100 |
| Matrix_350 | ARR14 | Not available | Upstream | -100 |
| Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -94 |
| Matrix_385 | DEAR4 | Not available | Upstream | -94 |
| Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -94 |
| Motif_309 | GATA promoter motif | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | Upstream | -58 |
| Motif_358 | UP2ATMSD | Up2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis | Upstream | -241 |
| Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -71 |
Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench