PLAZA 3.0 Dicots DNA motifs

View conserved binding sites

Gene: AT4G30490
Description: AFG1-like ATPase family protein
Alias: Not available

Binding site	Name	Description	Location	Position
Matrix_269	FHY3/FAR1	Not available	Upstream	-264
Matrix_278	AtbZIP44	Not available	Upstream	-842
Motif_216	PYRIMIDINEBOXHVEPB1	Pyrimidine box found in the barley EPB-1 (cysteine proteinase) gene promoter; Located between -120 to -113; Required for GA induction	Upstream	-1117
Motif_292	MYBPZM	Core of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genes	Upstream	-882
Motif_309	GATA promoter motif	Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics	Upstream	-211
Motif_391	REALPHALGLHCB21	REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulation	Upstream	-383
Motif_484	RAV1-B binding site motif	Binding consensus sequence of an Arabidopsis transcription factor, RAV1; RAV1 specifically binds to DNA with bipartite sequence motifs of RAV1-A (CAACA) and RAV1-B (CACCTG); RAV1 protein contain AP2-like and B3-like domains; The AP2-like and B3-like domains recognize the CAACA and CACCTG motifs, respectively; The expression level of RAV1 were relatively high in rosette leaves and roots; RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	Upstream	-1529
Motif_584	UPRE-III(bZIP60)	The plant-specific transcription factor NAC103 is induced by bZIP60 through a new cis-regulatory element to modulate the unfolded protein response in Arabidopsis	Upstream	-189
Motif_615	MARTBOX	T-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)	Upstream	-347
			Upstream	-349
			Upstream	-352
			Upstream	-355
Motif_69	CTRMCAMV35S	CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA	Upstream	-215
Motif_98	SEF3MOTIFGM	SEF3 binding site; Soybean consensus sequence found in the 5' upstream region of beta-conglycinin (7S globulin) gene; AACCCA(-27bp-)AACCCA; SEF=soybean embryo factor; SEF2; SEF3; SEF4	Upstream	-67
			Upstream	-1437