PLAZA 3.0 Dicots DNA motifs

View conserved binding sites

Gene: AT4G16340
Description: guanyl-nucleotide exchange factors;GTPase binding;GTP binding
Alias: SPK1

Binding site	Name	Description	Location	Position
Matrix_25	AP3	Not available	Intron	10343
			Intron	3766
			Intron	145
Matrix_324	AT2G01060	Not available	Intron	2445
Matrix_352	LEC2	Not available	Intron	6952
			Intron	2045
Matrix_408	GATA12	Not available	Upstream	-104
Matrix_43	AG	Not available	Intron	7681
Matrix_445	AG	Not available	Intron	7681
Matrix_98	AG	Isolation and characterization of the binding sequences for the product of the Arabidopsis floral homeotic gene AGAMOUS	Intron	7681
Motif_155	NODCON1GM	One of two putative nodulin consensus sequences; See also NODCON2GM; One of the consensus sequence motifs of organ-specific elements (OSE) characteristic of the promoters activated in infected cells of root nodules	Upstream	-144
			Upstream	-566
Motif_168	IBOX	I box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated gene	Upstream	-1273
			Upstream	-1386
Motif_181	IBOXCORENT	I-box core motif in the CAMs (conserved DNA modular arrays) associated with light-responsive promoter regions	Upstream	-1273
			Upstream	-1386
Motif_323	MYB1LEPR	Tomato Pti4(ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1(GTTAGTT), G box (CACGTG))	Upstream	-1188
Motif_98	SEF3MOTIFGM	SEF3 binding site; Soybean consensus sequence found in the 5' upstream region of beta-conglycinin (7S globulin) gene; AACCCA(-27bp-)AACCCA; SEF=soybean embryo factor; SEF2; SEF3; SEF4	Upstream	-976
			Upstream	-1149