View conserved binding sites


Gene
AT4G16190
Description
Papain family cysteine protease
Alias
Not available
Binding siteNameDescriptionLocationPosition
Matrix_109GBF3Not availableUpstream-99
Matrix_113ABI5Not availableUpstream-99
Matrix_122ABF1;AREB2Not availableUpstream-98
Matrix_129ABF1Not availableUpstream-98
Matrix_134ABF1Not availableUpstream-98
Matrix_145GBF4;AT5G44080Not availableUpstream-97
Matrix_156POC1Not availableUpstream-99
Matrix_192FHY3/FAR1Not availableUpstream-101
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-101
Matrix_300bZIP68;bZIP16Not availableUpstream-98
Matrix_331GBF1Not availableUpstream-99
Matrix_332SPT;ALCNot availableUpstream-98
Matrix_356PRR5Not availableUpstream-173
Matrix_407AP1Not availableIntron711
Matrix_461ATHB12Not availableUpstream-477
Matrix_466PRR5Not availableUpstream-162
Matrix_480BES1Not availableUpstream-99
Matrix_55PIF3Not availableUpstream-99
Matrix_7PIF4Not availableUpstream-98
Matrix_77PRR5Not availableUpstream-99
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-96
Motif_200GBOXLERBCSG box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBFUpstream-98
Motif_210REBETALGLHCB21REbeta found in Lemna gibba Lhcb21 gene promoter; Located at -114 to -109; A GATA sequence created at a position six nucleotides upstream could replace the function of REbeta; Required for phytochrome regulationUpstream-785
Motif_244ABRE-like binding site motifNot availableUpstream-98
Motif_262WRKY70Identification of a novel type of WRKY transcription factor binding site in elicitor-responsive cis-sequences from Arabidopsis thalianaUpstream-376
Motif_291ABFs binding site motifBinding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response elementUpstream-98
Motif_323MYB1LEPRTomato Pti4(ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1(GTTAGTT), G box (CACGTG))Upstream-120
Motif_349QARBNEXTAQAR (quantitative activator region) in promoter region of Brassica napus extA extensin geneUpstream-164
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-97
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-1055
Motif_638ABRE binding site motifNot availableUpstream-98
Motif_72GADOWNATSequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABREUpstream-163
Motif_79UPRMOTIFIIATMotif II in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etcUpstream-111