| Matrix_181 | Dof5.7 | Not available | Upstream | -714 |
| Matrix_30 | AtSPL8 | Functional dissection of the plant-specific SBP-domain: overlap of the DNA-binding and nuclear localization domains | Upstream | -1353 |
| Matrix_396 | AP3 | Not available | Upstream | -377 |
| | | Upstream | -542 |
| Motif_358 | UP2ATMSD | Up2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis | Upstream | -378 |
| | | Upstream | -542 |
| Motif_450 | E2FCONSENSUS | E2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plants | Upstream | -537 |
| | | Upstream | -803 |
| | | Upstream | -808 |
| | | Upstream | -1030 |
| Motif_591 | CBFHV | Binding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs) | Upstream | -1059 |
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