| Matrix_184 | AGL15 | Not available | Upstream | -1153 |
| Matrix_406 | ATERF-7 | Not available | Upstream | -155 |
| Matrix_418 | KNAT6;KNAT2 | Not available | Upstream | -155 |
| Matrix_462 | ATERF-8 | Not available | Upstream | -155 |
| Matrix_475 | AT5G64220 | Not available | Upstream | -218 |
| | | Upstream | -219 |
| Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -217 |
| | | Upstream | -303 |
| Motif_318 | CGCGBOXAT | CGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRs | Upstream | -218 |
| | | Upstream | -303 |
| Motif_339 | ABRE-like binding site motif | Molecular responses to dehydration and low temperature | Upstream | -811 |
| Motif_43 | CCA1 binding site motif | CCA1 binding site; CCA1 protein (myb-related transcription factor) interact with two imperfect repeats of AAMAATCT in Lhcb1*3 gene of Arabidopsis thaliana; Related to regulation by phytochrome;A myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene | Upstream | -601 |
| | | Upstream | -936 |
| | | Upstream | -1789 |
| Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -165 |
| | | Upstream | -183 |
| | | Upstream | -185 |
| | | Upstream | -187 |
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