View conserved binding sites


Gene
AT3G54460
Description
SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein
Alias
Q9M1I1
Binding siteNameDescriptionLocationPosition
Matrix_147ERF3;AT1G80580Not availableUpstream-2
Matrix_295ERF1Not availableUpstream-2
Matrix_360ORA59Not availableUpstream-2
Matrix_45DRNNot availableUpstream-2
Upstream-342
Matrix_462ATERF-8Not availableUpstream-2
Matrix_484ATERF13Not availableUpstream-2
Matrix_517ERF12Not availableUpstream-2
Motif_210REBETALGLHCB21REbeta found in Lemna gibba Lhcb21 gene promoter; Located at -114 to -109; A GATA sequence created at a position six nucleotides upstream could replace the function of REbeta; Required for phytochrome regulationUpstream-486
Motif_371DRE-like promoter motifThe Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental StressesUpstream-80
Motif_536TBOXATGAPBTbox found in the Arabidopsis thaliana GAPB gene promoter; Located between -94 and -89 (T1) and also between -84 and -79 (T2); Mutations in the Tbox resulted in reductions of light-activated gene transcription; GAPB encodes the B subunit of chloroplast glyceraldehyde-3-phosphate dehydrogenase(GADPH) of A.T.; Promoter analysis of the nuclear gene encoding the chloroplast glyceraldehyde-3-phosphate dehydrogenase B subunit of Arabidopsis thalianaUpstream-407
Motif_642SEF1MOTIFSEF1 (soybean embryo factor 1) binding motif; sequence found in 5'-upstream region (-640; -765) of soybean beta-conglicinin (7S globulin) geneUpstream-312
Motif_83CIACADIANLELHCRegion necessary for circadian expression of tomato Lhc geneUpstream-480