View conserved binding sites


Gene
AT3G45630
Description
RNA binding (RRM/RBD/RNP motifs) family protein
Alias
Not available
Binding siteNameDescriptionLocationPosition
Matrix_210ARR1Not availableUpstream-494
Matrix_396AP3Not availableUpstream-483
Matrix_4ARR14Not availableUpstream-494
Matrix_439AP3Not availableUpstream-588
Matrix_491AT1G68670;AT3G25790Not availableUpstream-494
Matrix_508APL;AT3G12730;AT3G24120;UNE16Not availableUpstream-494
Motif_193GLK1GLK transcription factors coordinate expression of the photosynthetic apparatus in ArabidopsisUpstream-641
Motif_243TELOBOXATEEF1AA1telo-box (telomere motif) found in the Arabidopsis (A.t.) eEF1AA1 gene promoter; Conserved in all known plant eEF1A gene promoters; Found in the 5' region of numerous genes encoding components of the translational apparatus; Required for the activation of expression in root primordia; Acts co-operatively with tef-box; Binding site of AtPur alpha-1; Plant interstitial telomere mitifs participate in the control of gene expression in root meristemsUpstream-483
Motif_292MYBPZMCore of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genesUpstream-763
Motif_358UP2ATMSDUp2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-484
Motif_391REALPHALGLHCB21REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulationUpstream-761
Motif_6492SSEEDPROTBANAPAConserved in many storage-protein gene promoters; May be important for high activity of the napA promoterUpstream-1892
Motif_83CIACADIANLELHCRegion necessary for circadian expression of tomato Lhc geneUpstream-1561
Upstream-1683