View conserved binding sites


Gene
AT3G44200
Description
NIMA (never in mitosis, gene A)-related 6
Alias
IBO1;Q0WPH8
Binding siteNameDescriptionLocationPosition
Matrix_269FHY3/FAR1Not availableUpstream-321
Upstream-318
Upstream-315
Matrix_312ARF11;MP;ARF6;IAA21;ARF8;ARF4Not availableUpstream-1110
Matrix_48PINot availableUpstream-280
Motif_371DRE-like promoter motifThe Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental StressesUpstream-1108
Motif_454DRECRTCOREATCore motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower)Upstream-1107
Motif_549TBF1The HSF-like transcription factor TBF1 is a major molecular switch for plant growth-to-defense transitionUpstream-322
Upstream-319
Upstream-316
Upstream-313
Motif_591CBFHVBinding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs)Upstream-1107
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-281