View conserved binding sites


Gene
AT3G29575
Description
ABI five binding protein 3
Alias
Q94F39;ABI five binding protein 3
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-432
Upstream-513
Upstream-514
Upstream-672
Upstream-673
Matrix_108PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-476
Matrix_109GBF3Not availableUpstream-432
Matrix_111ABF3Not availableUpstream-515
Upstream-516
Matrix_113ABI5Not availableUpstream-432
Upstream-515
Upstream-516
Upstream-575
Upstream-672
Upstream-673
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-473
Upstream-628
Matrix_120BEE2Not availableUpstream-477
Matrix_122ABF1;AREB2Not availableUpstream-432
Upstream-513
Upstream-514
Upstream-631
Upstream-672
Upstream-673
Matrix_129ABF1Not availableUpstream-433
Upstream-477
Upstream-576
Upstream-631
Upstream-673
Upstream-674
Matrix_133DYT1Not availableUpstream-516
Matrix_134ABF1Not availableUpstream-434
Upstream-515
Upstream-516
Upstream-576
Upstream-674
Upstream-675
Matrix_14ZCW32;AT5G62610Not availableUpstream-477
Matrix_145GBF4;AT5G44080Not availableUpstream-433
Upstream-434
Upstream-478
Upstream-632
Upstream-674
Upstream-675
Matrix_15PIF3_1Direct targeting of light signals to a promoter element-bound transcription factorUpstream-473
Upstream-572
Matrix_156POC1Not availableUpstream-476
Upstream-478
Matrix_158AT1G03040;LRL1;UNE12;LRL2;LRL3Not availableUpstream-477
Matrix_19PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signalingUpstream-474
Upstream-477
Matrix_192FHY3/FAR1Not availableUpstream-430
Upstream-516
Upstream-577
Upstream-670
Upstream-671
Matrix_194HYH;HY5Not availableUpstream-430
Upstream-573
Upstream-670
Upstream-671
Matrix_200PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815Not availableUpstream-477
Matrix_214AP1Not availableUpstream-431
Upstream-513
Upstream-671
Upstream-672
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-430
Upstream-573
Upstream-674
Upstream-675
Matrix_233MYC3Not availableUpstream-478
Matrix_24POC1Not availableUpstream-473
Upstream-572
Matrix_247PIF3Not availableUpstream-477
Matrix_25AP3Not availableUpstream-340
Upstream-345
Upstream-648
Matrix_251PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signalingUpstream-432
Upstream-672
Upstream-673
Matrix_264ATAREB1Not availableUpstream-430
Upstream-631
Upstream-670
Upstream-671
Matrix_296GBF2Not availableUpstream-477
Matrix_300bZIP68;bZIP16Not availableUpstream-433
Upstream-477
Upstream-673
Upstream-674
Matrix_301PIL5Not availableUpstream-428
Upstream-571
Upstream-632
Matrix_330MYC2;TT8Not availableUpstream-477
Matrix_331GBF1Not availableUpstream-432
Upstream-672
Upstream-673
Matrix_332SPT;ALCNot availableUpstream-477
Upstream-478
Matrix_338AP2Not availableUpstream-430
Upstream-573
Upstream-670
Upstream-671
Matrix_345POC1Not availableUpstream-473
Upstream-628
Matrix_356PRR5Not availableUpstream-430
Upstream-508
Upstream-569
Upstream-671
Matrix_359FLCNot availableUpstream-475
Upstream-513
Upstream-629
Matrix_403BZR1Not availableUpstream-574
Upstream-629
Upstream-671
Upstream-672
Matrix_440LFYNot availableUpstream-768
Matrix_443AGL15Not availableUpstream-431
Upstream-513
Upstream-574
Upstream-671
Upstream-672
Matrix_465MYC4Not availableUpstream-477
Matrix_488ABF1Not availableUpstream-623
Matrix_53MYC3Not availableUpstream-475
Matrix_55PIF3Not availableUpstream-432
Upstream-476
Upstream-672
Upstream-673
Matrix_64PIF5Not availableUpstream-478
Matrix_7PIF4Not availableUpstream-477
Matrix_77PRR5Not availableUpstream-431
Upstream-476
Upstream-671
Upstream-672
Matrix_80BIM1Not availableUpstream-432
Upstream-575
Motif_168IBOXI box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated geneUpstream-643
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-434
Upstream-478
Upstream-516
Upstream-577
Upstream-632
Upstream-675
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-434
Upstream-516
Upstream-675
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-433
Upstream-434
Upstream-477
Upstream-478
Upstream-515
Upstream-516
Upstream-577
Upstream-631
Upstream-632
Upstream-674
Upstream-675
Motif_244ABRE-like binding site motifNot availableUpstream-432
Upstream-434
Upstream-514
Upstream-516
Upstream-577
Upstream-673
Upstream-675
Motif_249DPBF1&2 binding site motifA novel class of bZIP transcription factors, DPBF-1 and 2 (Dc3 promoter-binding factor-1 and 2) binding core sequence; Found in the carrot Dc3 gene promoter; Dc3 expression is normally embryo-specific, and also can be induced by ABA; The Arabidopsis abscisic acid response gene ABI5 encodes a bZIP transcription factor; abi5 mutant have a pleiotropic defects in ABA response; ABI5 regulates a subset of late embryogenesis-abundant genes; GIA1 (growth-insensitivity to ABA) is identical to ABI5; Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid systemUpstream-433
Upstream-515
Upstream-516
Upstream-674
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-434
Upstream-478
Upstream-516
Upstream-577
Upstream-632
Upstream-675
Upstream-1224
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-434
Upstream-477
Upstream-478
Upstream-631
Upstream-675
Motif_473ABREOSRGA1ABRE (ABA responsive element) in rice RGA1 encoding a G protein alpha subunit;ABRE; ABA and water-stress responses; Found in maize rab28; maize rab28 is ABA-inducible in embryos and vegetative tissues; Found in the Arabidopsis (A.t.) alcohol dehydrogenase (Adh) gene promoter; ABRE2; Found in the maize (Z.m.) Cat1 gene promoter; Responsible for the induction by ABA; Binding site of CBF2; Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance; The CBF genes do not appear to be autoregulated through the CRT/DRE sequence;The cis-regulatory element CCACGTGG is involved in ABA and water-stress responses of the maize gene rab28. Characterization of a maize G-box binding factor that is induced by hypoxiaUpstream-477
Motif_498SGBFGMGMAUX28bZIP proteins SGBF-1 and SGBF-2 binding site in soybean GmAux28 gene promoterUpstream-432
Upstream-673
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-432
Upstream-517
Upstream-578
Upstream-673
Motif_70CANBNNAPACore of (CA)n element in storage protein genes in Brasica napus; embryo- and endosperm-specific transcription of napin (storage protein) gene, napA; seed specificity; activator and repressorUpstream-293
Motif_72GADOWNATSequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABREUpstream-432
Upstream-517
Upstream-578
Upstream-673
Motif_92ABREATRD22ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22Upstream-629