View conserved binding sites


Gene
AT3G15520
Description
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Alias
P82869
Binding siteNameDescriptionLocationPosition
Matrix_169E2F1Not availableUpstream-62
Upstream-63
Upstream-66
Upstream-67
Matrix_306TGA1TGA1 and G-box binding factors: two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGGIntron1437
Motif_244ABRE-like binding site motifNot availableUpstream-89
Motif_286SEBFCONSSTPR10ABinding site of the potato silencing element binding factor (SEBF) gene found in promoter of pathogenesis-related gene (PR-10a); Located between -45 and -39; Similar to the auxin response elementUpstream-24
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-66
Upstream-502
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-89
Motif_365ARF1 binding site motifARF (auxin response factor) binding site found in the promoters of primary/early auxin response genes of Arabidopsis thaliana; AuxRE;Binding site of Arabidopsis ARF1 (Auxin response factor1); Sequence found in NDE element in Soybean SAUR (Small Auxin-Up RNA) 15A gene promoter;Found in D1 or D4 element in Soybean GH3 promoter; This element was enriched in the 5'-flanking region of genes up-regulated by both IAA and BL;Dimerization and DNA binding of auxin response factorsUpstream-24
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-62
Upstream-226
Motif_502MYB98The MYB98 subcircuit of the synergid gene regulatory network includes genes directly and indirectly regulated by MYB98Upstream-16
Motif_602E2Fc;E2FdThe E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plantsUpstream-62
Motif_79UPRMOTIFIIATMotif II in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etcUpstream-91