View conserved binding sites


Gene
AT3G01650
Description
RING domain ligase1
Alias
Q9SS90;RING domain ligase1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-319
Matrix_146ORA47Not availableUpstream-319
Matrix_147ERF3;AT1G80580Not availableUpstream-317
Matrix_224ERF1Not availableUpstream-318
Matrix_234RAP2.3Not availableUpstream-319
Matrix_252RAP2.6Not availableUpstream-319
Matrix_272DEAR4Not availableUpstream-319
Matrix_287ERF2Not availableUpstream-319
Matrix_288RAP2.3Not availableUpstream-318
Matrix_295ERF1Not availableUpstream-317
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-318
Matrix_334AT3G23230Not availableUpstream-318
Matrix_343AT2G33710Not availableUpstream-319
Matrix_355ERF10;ERF11Not availableUpstream-318
Matrix_360ORA59Not availableUpstream-317
Matrix_363RAP2.3Not availableUpstream-318
Matrix_378ATERF1Not availableUpstream-319
Matrix_406ATERF-7Not availableUpstream-317
Matrix_409DEAR3Not availableUpstream-318
Matrix_426CRF1;CRF2Not availableUpstream-318
Matrix_45DRNNot availableUpstream-317
Matrix_473RRTF1Not availableUpstream-319
Matrix_484ATERF13Not availableUpstream-317
Matrix_50ATERF14;AT5G43410Not availableUpstream-318
Matrix_506DRNL;ATERF-4Not availableUpstream-318
Matrix_517ERF12Not availableUpstream-317
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-318
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-318
Motif_270ELRECOREPCRP1ElRE (Elicitor Responsive Element) core of parsley PR1 genes; consensus sequence of elements W1 and W2 of parsley PR1-1 and PR1-2 promoters; Box W1 and W2 are the binding site of WRKY1 and WRKY2, respectively; ERE; WA box; One of the W boxes found in the Parsley WRKY1 gene promoter; Required for elicitor responsiveness; WC box WB box and WC box constitute a palindrome; WRKY1 protein binding site; W-box found in thioredoxin h5 gene in ArabidopsisUpstream-800
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-316
Motif_422SP8BFIBSP8BIBOne of SPBF binding site (SP8b); Found at -330, -220, and -200 of gSPO-B1 (sporamin) gene, and also at -80 of gB-Amy (beta-amylase) gene; SP8BF recognizes both SP8a and SP8b sequences; See also SP8BFIBSP8AIB; SP8BF activity is also found in tobacco; SP8b found in the 5' upstream region of three differnt genes coding for sporamin and beta-amylase; Binding site of SPF1; SPF1 also binds to the SP8bUpstream-1141
Motif_469QELEMENTZMZM13Q(quantitative)-element in maize ZM13 gene promoter; Found at -107 to -102; Involved in expression enhancing activity; ZM13 is a maize homolog of tomato LAT52 gene; ZM13 is a pollen-specific maize geneUpstream-799
Motif_643DRE2COREZMRAB17DRE2 core found in maize rab17 gene promoter; DBF1 and DBF2 bound to DRE2; rab17 is expressed during late embryogenesis, and is induced by ABAUpstream-387
Motif_653INTRONLOWER3' intron-exon splice junctions; Plant intron lower sequence; Consensus sequence for plant intronsUpstream-63