View conserved binding sites


Gene
AT2G40180
Description
phosphatase 2C5
Alias
PP2C5;Q9XEE8
Binding siteNameDescriptionLocationPosition
Matrix_132SOC1Not availableUpstream-584
Matrix_133DYT1Not availableUpstream-1283
Matrix_202WRKY71;WRKY28;WRKY8Not availableUpstream-171
Matrix_245WRKY62;WRKY38Not availableUpstream-170
Matrix_249WRKY11Not availableUpstream-172
Matrix_293WRKY38Not availableUpstream-172
Matrix_314WRKY65;WRKY14;WRKY35;WRKY69;WRKY16;ATWRKY52Not availableUpstream-172
Matrix_329WRKY12Not availableUpstream-172
Matrix_58WRKY55;ATWRKY54;WRKY46;WRKY70;AtWRKY41;WRKY53;WRKY30Not availableUpstream-173
Motif_187AT1BOXAT-1 box (AT-rich element) found in the promoter region of the genes for tobacco chlorophyll a/b binding protein (cab) and small subunit of ribulose-1,5-bisphosphate carboxylase (rbcS); Deletion of a region containing the AT-1 site in the tomato RBCS3A gene strongly inhibited reporter gene expression, whereas AT-1 site in N. plumbaginifolia CAB gene (cab-E) is in a negative elementUpstream-1363
Motif_189CMSRE1IBSPOACMSRE-1 (Carbohydrate Metabolite Signal Responsive Element 1) found in the promoter of sweet potato sporamin A geneUpstream-406
Motif_348WBBOXPCWRKY1WB box; WRKY proteins bind specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box; Found in amylase gene in sweet potato, alpha-Amy2 genes in wheat, barley, and wild oat, PR1 gene in parsley, and a transcription factor gene in ArabidopsisUpstream-253
Motif_371DRE-like promoter motifThe Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental StressesUpstream-264
Motif_392PALBOXAPCBox A; Consensus; One of three putative cis-acting elements (boxes P, A, and L) of phenylalanine ammonia-lyase (PAL; EC 4.3.1.5) genes in parsley (P.c.); None of these elements (boxes P, A, and L) alone, or the promoter region containing all of them together, conferred elicitor or light responsiveness. These elements appear to be necessary but not sufficient for elicitor- or light-mediated PAL gene activation; See also Box P, Box LUpstream-405
Motif_454DRECRTCOREATCore motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower)Upstream-264
Motif_49TATAPVTRNALEUTATA-like motif; A TATA-like sequence found in Phaseolus vulgaris tRNALeu gene promoter; Frequently observed upstream of plant tRNA genes; Found in maize glycolytic glyceraldehyde-3-phospate dehydrogenase 4 (GapC4) gene promoter; Binding site of TATA binding protein (TBP)Upstream-138
Motif_591CBFHVBinding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs)Upstream-264
Motif_618MYB1ATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in ArabidopsisUpstream-759
Motif_626ACGTTBOXT-box according to the nomenclature of ACGT elements; One of ACGT elements; See also ACGTABOX,ACGTCBOX, and CACGTGMOTIFUpstream-1500
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-1799
Motif_643DRE2COREZMRAB17DRE2 core found in maize rab17 gene promoter; DBF1 and DBF2 bound to DRE2; rab17 is expressed during late embryogenesis, and is induced by ABAUpstream-264
Motif_92ABREATRD22ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22Upstream-1801