View conserved binding sites


Gene
AT2G23430
Description
Cyclin-dependent kinase inhibitor family protein
Alias
ICK1;Q67Y93
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-259
Matrix_110ATABI4;AT3G57600Not availableUpstream-203
Upstream-204
Matrix_122ABF1;AREB2Not availableUpstream-259
Upstream-260
Upstream-651
Matrix_130TCP16Not availableUpstream-161
Matrix_134ABF1Not availableUpstream-260
Upstream-261
Matrix_146ORA47Not availableUpstream-202
Upstream-203
Matrix_16AT3G04450;PHL1Not availableUpstream-180
Matrix_165KNAT1Not availableUpstream-175
Upstream-176
Matrix_176MYB98Not availableUpstream-165
Upstream-166
Matrix_190ATERF1Not availableUpstream-202
Upstream-203
Upstream-204
Matrix_216TCP16Not availableUpstream-161
Matrix_234RAP2.3Not availableUpstream-202
Upstream-203
Upstream-204
Matrix_252RAP2.6Not availableUpstream-202
Upstream-203
Upstream-204
Matrix_266TCP16Determinants of the DNA binding specificity of class I and class II TCP transcription factorsUpstream-161
Matrix_281TCP13Not availableUpstream-161
Matrix_288RAP2.3Not availableUpstream-201
Upstream-202
Matrix_294MEE35Not availableUpstream-161
Matrix_324AT2G01060Not availableUpstream-180
Matrix_361AT1G25550Not availableUpstream-180
Matrix_378ATERF1Not availableUpstream-202
Upstream-203
Matrix_380ATMYR1Not availableUpstream-179
Matrix_403BZR1Not availableUpstream-258
Upstream-649
Matrix_418KNAT6;KNAT2Not availableUpstream-174
Matrix_423AT3G04030Not availableUpstream-180
Matrix_443AGL15Not availableUpstream-258
Matrix_473RRTF1Not availableUpstream-202
Upstream-203
Matrix_491AT1G68670;AT3G25790Not availableUpstream-180
Matrix_508APL;AT3G12730;AT3G24120;UNE16Not availableUpstream-180
Matrix_517ERF12Not availableUpstream-205
Upstream-206
Matrix_69AT2G03500Not availableUpstream-180
Matrix_82TCP17Not availableUpstream-161
Matrix_94TCP5Not availableUpstream-161
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-116
Motif_155NODCON1GMOne of two putative nodulin consensus sequences; See also NODCON2GM; One of the consensus sequence motifs of organ-specific elements (OSE) characteristic of the promoters activated in infected cells of root nodulesUpstream-185
Motif_182MYB2CONSENSUSATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22Upstream-167
Upstream-190
Upstream-210
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisUpstream-167
Upstream-190
Upstream-210
Motif_321TATABOX5TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysisUpstream-213
Motif_336MYBMOUSEBinding site for mouse c-myb proteinUpstream-167
Upstream-190
Upstream-210
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-179
Upstream-193
Motif_630WBOXNTCHN48W box identified in the region between -125 and -69 of a tobacco class I basic chitinase gene CHN48; NtWRKY1, NtWRKY2 and NtWRKY4 bound to W box; NtWRKYs possibly involved in elicitor-respsonsive transcription of defense genes in tobaccoUpstream-111
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-43
Upstream-45