Matrix_104 | PI | Not available | Upstream | -259 |
Matrix_110 | ATABI4;AT3G57600 | Not available | Upstream | -203 |
| | | Upstream | -204 |
Matrix_122 | ABF1;AREB2 | Not available | Upstream | -259 |
| | | Upstream | -260 |
| | | Upstream | -651 |
Matrix_130 | TCP16 | Not available | Upstream | -161 |
Matrix_134 | ABF1 | Not available | Upstream | -260 |
| | | Upstream | -261 |
Matrix_146 | ORA47 | Not available | Upstream | -202 |
| | | Upstream | -203 |
Matrix_16 | AT3G04450;PHL1 | Not available | Upstream | -180 |
Matrix_165 | KNAT1 | Not available | Upstream | -175 |
| | | Upstream | -176 |
Matrix_176 | MYB98 | Not available | Upstream | -165 |
| | | Upstream | -166 |
Matrix_190 | ATERF1 | Not available | Upstream | -202 |
| | | Upstream | -203 |
| | | Upstream | -204 |
Matrix_216 | TCP16 | Not available | Upstream | -161 |
Matrix_234 | RAP2.3 | Not available | Upstream | -202 |
| | | Upstream | -203 |
| | | Upstream | -204 |
Matrix_252 | RAP2.6 | Not available | Upstream | -202 |
| | | Upstream | -203 |
| | | Upstream | -204 |
Matrix_266 | TCP16 | Determinants of the DNA binding specificity of class I and class II TCP transcription factors | Upstream | -161 |
Matrix_281 | TCP13 | Not available | Upstream | -161 |
Matrix_288 | RAP2.3 | Not available | Upstream | -201 |
| | | Upstream | -202 |
Matrix_294 | MEE35 | Not available | Upstream | -161 |
Matrix_324 | AT2G01060 | Not available | Upstream | -180 |
Matrix_361 | AT1G25550 | Not available | Upstream | -180 |
Matrix_378 | ATERF1 | Not available | Upstream | -202 |
| | | Upstream | -203 |
Matrix_380 | ATMYR1 | Not available | Upstream | -179 |
Matrix_403 | BZR1 | Not available | Upstream | -258 |
| | | Upstream | -649 |
Matrix_418 | KNAT6;KNAT2 | Not available | Upstream | -174 |
Matrix_423 | AT3G04030 | Not available | Upstream | -180 |
Matrix_443 | AGL15 | Not available | Upstream | -258 |
Matrix_473 | RRTF1 | Not available | Upstream | -202 |
| | | Upstream | -203 |
Matrix_491 | AT1G68670;AT3G25790 | Not available | Upstream | -180 |
Matrix_508 | APL;AT3G12730;AT3G24120;UNE16 | Not available | Upstream | -180 |
Matrix_517 | ERF12 | Not available | Upstream | -205 |
| | | Upstream | -206 |
Matrix_69 | AT2G03500 | Not available | Upstream | -180 |
Matrix_82 | TCP17 | Not available | Upstream | -161 |
Matrix_94 | TCP5 | Not available | Upstream | -161 |
Motif_116 | INRNTPSADB | Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box | Upstream | -116 |
Motif_155 | NODCON1GM | One of two putative nodulin consensus sequences; See also NODCON2GM; One of the consensus sequence motifs of organ-specific elements (OSE) characteristic of the promoters activated in infected cells of root nodules | Upstream | -185 |
Motif_182 | MYB2CONSENSUSAT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22 | Upstream | -167 |
| | | Upstream | -190 |
| | | Upstream | -210 |
Motif_221 | MYBCORE | Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis | Upstream | -167 |
| | | Upstream | -190 |
| | | Upstream | -210 |
Motif_321 | TATABOX5 | TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysis | Upstream | -213 |
Motif_336 | MYBMOUSE | Binding site for mouse c-myb protein | Upstream | -167 |
| | | Upstream | -190 |
| | | Upstream | -210 |
Motif_450 | E2FCONSENSUS | E2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plants | Upstream | -179 |
| | | Upstream | -193 |
Motif_630 | WBOXNTCHN48 | W box identified in the region between -125 and -69 of a tobacco class I basic chitinase gene CHN48; NtWRKY1, NtWRKY2 and NtWRKY4 bound to W box; NtWRKYs possibly involved in elicitor-respsonsive transcription of defense genes in tobacco | Upstream | -111 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -43 |
| | | Upstream | -45 |